HHsearch alignment for GI: 254780766 and conserved domain: cd03297
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=98.52 E-value=1e-06 Score=63.05 Aligned_cols=79 Identities=25% Similarity=0.269 Sum_probs=65.9
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHC
Q ss_conf 312205899999999999999999870899789980122015989999999997417----9809998069678543212
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI----GSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~----~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 130 ~~LSGGq~QRVaiARAL~---------~~P~llLlDEP~saLD~~~~~~i~~~l~~l~~~~~~t~i~VTHd~~e~~~lad 200 (214)
T cd03297 130 AQLSGGEKQRVALARALA---------AQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLAD 200 (214)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCC
T ss_conf 779929999999999987---------19999998088766699999999999999999859989999899999999699
Q ss_pred CEEEEEECCCEEEE
Q ss_conf 60079972896895
Q gi|254780766|r 361 TAKFMRISNHQALC 374 (375)
Q Consensus 361 ~~~~~~i~~g~~~~ 374 (375)
T Consensus 201 r--v~vm~dG~Ivq 212 (214)
T cd03297 201 R--IVVMEDGRLQY 212 (214)
T ss_pred E--EEEEECCEEEE
T ss_conf 9--99998989998