HHsearch alignment for GI: 254780766 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.71 E-value=0.0015 Score=42.29 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=25.0
Q ss_pred HHHEEEECCC-CEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 4553673279-87999868998644489999997
Q gi|254780766|r 18 YASLRLVFDA-QHTIFVGDNGVGKTNILEAISFL 50 (375)
Q Consensus 18 ~~~~~i~f~~-~~n~i~G~NG~GKT~iLEAI~~l 50 (375)
T Consensus 15 L~~vs~~v~~Ge~~~iiGpSGsGKSTLlr~i~Gl 48 (235)
T cd03299 15 LKNVSLEVERGDYFVILGPTGSGKSVLLETIAGF 48 (235)
T ss_pred ECCCEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 9014879889989999999963599999999749