HHsearch alignment for GI: 254780766 and conserved domain: cd03369
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=99.23 E-value=7.7e-10 Score=83.41 Aligned_cols=77 Identities=16% Similarity=0.211 Sum_probs=61.8
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHCCEE
Q ss_conf 12205899999999999999999870899789980122015989999999997417--9809998069678543212600
Q gi|254780766|r 286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTDKSVFDSLNETAK 363 (375)
Q Consensus 286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~~~~~~~~~~~~~ 363 (375)
T Consensus 125 ~LSgGqkQrl~iARal~---------~~p~ililDEpts~LD~~~~~~i~~~i~~~~~~~Tvi~itH~l~~~~~~-D--~ 192 (207)
T cd03369 125 NLSQGQRQLLCLARALL---------KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDY-D--K 192 (207)
T ss_pred CCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHC-C--E
T ss_conf 86989999999999997---------0899999816344489899999999999975999999990799999859-9--9
Q ss_pred EEEECCCEEEE
Q ss_conf 79972896895
Q gi|254780766|r 364 FMRISNHQALC 374 (375)
Q Consensus 364 ~~~i~~g~~~~ 374 (375)
T Consensus 193 Iivl~~G~Ive 203 (207)
T cd03369 193 ILVMDAGEVKE 203 (207)
T ss_pred EEEEECCEEEE
T ss_conf 99998999998