HHsearch alignment for GI: 254780767 and conserved domain: COG0763
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=815.01 Aligned_cols=377 Identities=40% Similarity=0.652 Sum_probs=360.6
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74599997682147899999999997389983999971789994788065044453110136746645999999999986
Q gi|254780767|r 3 SLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVE 82 (383)
Q Consensus 3 ~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~ 82 (383)
T Consensus 1 ~~ki~i~AGE~SGDllGa~LikaLk~~~~-~~efvGvgG~~m~aeG~~sl~~~~elsvmGf~EVL~~lp~llk~~~~~~~ 79 (381)
T COG0763 1 MLKIALSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEKMEAEGLESLFDMEELSVMGFVEVLGRLPRLLKIRRELVR 79 (381)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHCC-CEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 94599990444311468999999986389-83899817678886557655588998782299999988999999999999
Q ss_pred HCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCE
Q ss_conf 10012888689851177657999986630134631111002211003663557999998640156774223200255314
Q gi|254780767|r 83 LIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKEVMQRLGGPPT 162 (383)
Q Consensus 83 ~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k~~~~~~ 162 (383)
T Consensus 80 ~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~Ra~~i~~~~D~lLailPFE~~~y~k~-g~~~ 158 (381)
T COG0763 80 YILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKRAVKIAKYVDHLLAILPFEPAFYDKF-GLPC 158 (381)
T ss_pred HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEECHHHHHHHHHHHHHEEEECCCCHHHHHHC-CCCE
T ss_conf 998559988999678988649999999708999869997853056552168999997617214367788999855-9970
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
Q ss_conf 76388211221001355888976187655650599853874301230511189998764027351262016633688999
Q gi|254780767|r 163 TFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTVSSQENLVR 242 (383)
Q Consensus 163 ~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 242 (383)
T Consensus 159 ~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~ 238 (381)
T COG0763 159 TYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRRII 238 (381)
T ss_pred EEECCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
T ss_conf 89678056423443457899998289977876998168858899987789999999998658996599956847889999
Q ss_pred HHHHHCCC-CCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCEEEE-EECCCCCCEEEEHHHCCC
Q ss_conf 99960488-8505520552035788763552331156688876275302540577410000-102467610230244078
Q gi|254780767|r 243 CIVSKWDI-SPEIIIDKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSIYKSEWIVNFF-IFYIKTWTCALPNLIVDY 320 (383)
Q Consensus 243 ~~~~~~~~-~~~i~~~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Yk~~~lt~~i-~~lik~~~i~LpNii~~~ 320 (383)
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aSGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~ 318 (381)
T COG0763 239 EEALKWEVAGLSLILIDGEKRKAFAAADAALAASGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR 318 (381)
T ss_pred HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHCCC
T ss_conf 99862334576078407457899998418998446799999982999799994458899999986167724436886187
Q ss_pred CCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf 42612420548989999999998449899999999999999983899998999999999861
Q gi|254780767|r 321 PLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMAAEIVLQVL 382 (383)
Q Consensus 321 ~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~AA~~I~~~L 382 (383)
T Consensus 319 ~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~-~~~e~aA~~vl~~~ 379 (381)
T COG0763 319 EIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED-PASEIAAQAVLELL 379 (381)
T ss_pred CCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH
T ss_conf 30467775316999999999998348676999999999999997589-68899999999874