HHsearch alignment for GI: 254780767 and conserved domain: COG2327

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis].
Probab=94.53  E-value=0.42  Score=27.26  Aligned_cols=269  Identities=16%  Similarity=0.227  Sum_probs=117.3

Q ss_pred             CEEEEEEC---CCCH-HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEE-ECHHHCCE----EE-HHHHHHHHHHH
Q ss_conf             45999976---8214-7899999999997389983999971789994788065-04445311----01-36746645999
Q gi|254780767|r    4 LKIAVIAG---EISG-DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSL-FDFSELSV----IG-IMQVVRHLPQF   73 (383)
Q Consensus         4 mki~i~aG---E~SG-D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~-~~~~~l~v----~G-~~evl~~~~~~   73 (383)
T Consensus         1 m~~~L~g~~g~gN~Gdeail~all~~l~~~-~~~~~~~~~~~~p--~~i~~p~~~~~~p~~~~~~l~g~~k~v~R~~~k~   77 (385)
T COG2327           1 MKALLLGYYGFGNIGDEAILKALLDMLRRL-NPDAKVLVMGRRP--PVIVDPVFLSANPEGSAAGLNGRVKSVLRRRLKH   77 (385)
T ss_pred             CEEEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEECCC--CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             926888300478764599999999999853-8664435650478--6001313552786667203438899999975515


Q ss_pred             HHHHHHHHHHCCCCCCCEEEEE------C---------HHHHHHHHHHHHHHHCCCCCCEEE---ECCCCCCCCCCCHHH
Q ss_conf             9999999861001288868985------1---------177657999986630134631111---002211003663557
Q gi|254780767|r   74 IFRINQTVELIVSSKPDVLLIV------D---------NPDFTHRVAKRVRKKMPNLPIINY---VCPSVWAWREGRARK  135 (383)
Q Consensus        74 ~~~~~~~~~~i~~~~Pd~vi~i------D---------~pgFnl~lak~lkk~~~~ipvi~y---v~PqvWAWr~~R~k~  135 (383)
T Consensus        78 -~~~~~il~~l--~~~d~~I~~Gg~l~~d~~~~~~~~~~~~~-~~la~l~-----~kp~~~~g~svGP~~----~~~s~~  144 (385)
T COG2327          78 -PGLVSILSAL--GKADLIIIGGGGLLQDVTSSRSIIYYGGS-ILLARLA-----GKPTFFFGQSVGPLK----HPLSRQ  144 (385)
T ss_pred             -CCHHHHHHHH--HHCCEEEECCCCCCCCCCCCCEEHHHHHH-HHHHHHC-----CCCEEEEECCCCCCC----CHHHHH
T ss_conf             -3089999985--01788998485301576566121106889-9999975-----998799955678766----777999


Q ss_pred             HHHHHHHHCC----CCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE-EECCCC-CCHHH-
Q ss_conf             9999986401----5677422320025531476388211221001355888976187655650599-853874-30123-
Q gi|254780767|r  136 MCAYINQVIS----ILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILL-LPGSRA-QEIYK-  208 (383)
Q Consensus       136 ~~~~~d~~~~----ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~l-lPGSR~-~EI~~-  208 (383)
T Consensus       145 ~~~~~~~~~s~i~vRD~~S~~llk~-~gi~a~l~~D~Af~L~~~~~~~~~~----~~~~~~~~~~i~lr~~~~~~t~~~~  219 (385)
T COG2327         145 LLNYVLGGCSAISVRDPVSYELLKQ-LGINARLVTDPAFLLPASSQNATAS----DVEAREKTVAITLRGLHPDNTAQRS  219 (385)
T ss_pred             HHHHHHCCCCEEEEECHHHHHHHHH-CCCCEEEECCCCEECCCCCCCCCCC----CCCCCCCEEEEEECCCCCCHHHHHH
T ss_conf             9998856774899836875999998-0998376058402234544465521----1003455379994146775156678


Q ss_pred             HCCCHHHHHHHH-HHCCCCCEEEECCC--CCHHHHHHHHHHHCCCCCEEEEECCCC----HHHHHHHHHHHCCCHHHHHH
Q ss_conf             051118999876-40273512620166--336889999996048885055205520----35788763552331156688
Q gi|254780767|r  209 ILPFFESAVASL-VKRNPFFRFSLVTV--SSQENLVRCIVSKWDISPEIIIDKEQK----KQVFMTCNAAMAASGTVILE  281 (383)
Q Consensus       209 ~lP~~l~~~~~l-~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~l~~sd~ai~~SGTaTLE  281 (383)
T Consensus       220 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~i~~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~HsaI~  299 (385)
T COG2327         220 ILKYVNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRLHSAIM  299 (385)
T ss_pred             HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEHHHHHHH
T ss_conf             99989999999998641044887320455421678999876438720068614327889887751574598621689999


Q ss_pred             HHHHCCCEEEEC
Q ss_conf             876275302540
Q gi|254780767|r  282 LALCGIPVVSIY  293 (383)
Q Consensus       282 ~al~g~P~IV~Y  293 (383)
T Consensus       300 al~~g~p~i~i~  311 (385)
T COG2327         300 ALAFGVPAIAIA  311 (385)
T ss_pred             HHHCCCCEEEEE
T ss_conf             986599758986