HHsearch alignment for GI: 254780767 and conserved domain: COG2327
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis].
Probab=94.53 E-value=0.42 Score=27.26 Aligned_cols=269 Identities=16% Similarity=0.227 Sum_probs=117.3
Q ss_pred CEEEEEEC---CCCH-HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEE-ECHHHCCE----EE-HHHHHHHHHHH
Q ss_conf 45999976---8214-7899999999997389983999971789994788065-04445311----01-36746645999
Q gi|254780767|r 4 LKIAVIAG---EISG-DLLAGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSL-FDFSELSV----IG-IMQVVRHLPQF 73 (383)
Q Consensus 4 mki~i~aG---E~SG-D~~~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~-~~~~~l~v----~G-~~evl~~~~~~ 73 (383)
T Consensus 1 m~~~L~g~~g~gN~Gdeail~all~~l~~~-~~~~~~~~~~~~p--~~i~~p~~~~~~p~~~~~~l~g~~k~v~R~~~k~ 77 (385)
T COG2327 1 MKALLLGYYGFGNIGDEAILKALLDMLRRL-NPDAKVLVMGRRP--PVIVDPVFLSANPEGSAAGLNGRVKSVLRRRLKH 77 (385)
T ss_pred CEEEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEECCC--CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 926888300478764599999999999853-8664435650478--6001313552786667203438899999975515
Q ss_pred HHHHHHHHHHCCCCCCCEEEEE------C---------HHHHHHHHHHHHHHHCCCCCCEEE---ECCCCCCCCCCCHHH
Q ss_conf 9999999861001288868985------1---------177657999986630134631111---002211003663557
Q gi|254780767|r 74 IFRINQTVELIVSSKPDVLLIV------D---------NPDFTHRVAKRVRKKMPNLPIINY---VCPSVWAWREGRARK 135 (383)
Q Consensus 74 ~~~~~~~~~~i~~~~Pd~vi~i------D---------~pgFnl~lak~lkk~~~~ipvi~y---v~PqvWAWr~~R~k~ 135 (383)
T Consensus 78 -~~~~~il~~l--~~~d~~I~~Gg~l~~d~~~~~~~~~~~~~-~~la~l~-----~kp~~~~g~svGP~~----~~~s~~ 144 (385)
T COG2327 78 -PGLVSILSAL--GKADLIIIGGGGLLQDVTSSRSIIYYGGS-ILLARLA-----GKPTFFFGQSVGPLK----HPLSRQ 144 (385)
T ss_pred -CCHHHHHHHH--HHCCEEEECCCCCCCCCCCCCEEHHHHHH-HHHHHHC-----CCCEEEEECCCCCCC----CHHHHH
T ss_conf -3089999985--01788998485301576566121106889-9999975-----998799955678766----777999
Q ss_pred HHHHHHHHCC----CCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE-EECCCC-CCHHH-
Q ss_conf 9999986401----5677422320025531476388211221001355888976187655650599-853874-30123-
Q gi|254780767|r 136 MCAYINQVIS----ILPFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILL-LPGSRA-QEIYK- 208 (383)
Q Consensus 136 ~~~~~d~~~~----ifpFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~l-lPGSR~-~EI~~- 208 (383)
T Consensus 145 ~~~~~~~~~s~i~vRD~~S~~llk~-~gi~a~l~~D~Af~L~~~~~~~~~~----~~~~~~~~~~i~lr~~~~~~t~~~~ 219 (385)
T COG2327 145 LLNYVLGGCSAISVRDPVSYELLKQ-LGINARLVTDPAFLLPASSQNATAS----DVEAREKTVAITLRGLHPDNTAQRS 219 (385)
T ss_pred HHHHHHCCCCEEEEECHHHHHHHHH-CCCCEEEECCCCEECCCCCCCCCCC----CCCCCCCEEEEEECCCCCCHHHHHH
T ss_conf 9998856774899836875999998-0998376058402234544465521----1003455379994146775156678
Q ss_pred HCCCHHHHHHHH-HHCCCCCEEEECCC--CCHHHHHHHHHHHCCCCCEEEEECCCC----HHHHHHHHHHHCCCHHHHHH
Q ss_conf 051118999876-40273512620166--336889999996048885055205520----35788763552331156688
Q gi|254780767|r 209 ILPFFESAVASL-VKRNPFFRFSLVTV--SSQENLVRCIVSKWDISPEIIIDKEQK----KQVFMTCNAAMAASGTVILE 281 (383)
Q Consensus 209 ~lP~~l~~~~~l-~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~l~~sd~ai~~SGTaTLE 281 (383)
T Consensus 220 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~i~~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~HsaI~ 299 (385)
T COG2327 220 ILKYVNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRLHSAIM 299 (385)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEHHHHHHH
T ss_conf 99989999999998641044887320455421678999876438720068614327889887751574598621689999
Q ss_pred HHHHCCCEEEEC
Q ss_conf 876275302540
Q gi|254780767|r 282 LALCGIPVVSIY 293 (383)
Q Consensus 282 ~al~g~P~IV~Y 293 (383)
T Consensus 300 al~~g~p~i~i~ 311 (385)
T COG2327 300 ALAFGVPAIAIA 311 (385)
T ss_pred HHHCCCCEEEEE
T ss_conf 986599758986