HHsearch alignment for GI: 254780767 and conserved domain: COG3980
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane].
Probab=98.99 E-value=1.3e-07 Score=70.24 Aligned_cols=291 Identities=14% Similarity=0.207 Sum_probs=166.8
Q ss_pred CEEEEEE--CCCCHHHH--HH-HHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHH
Q ss_conf 4599997--68214789--99-9999999738998399997178999478806504445311013674664599999999
Q gi|254780767|r 4 LKIAVIA--GEISGDLL--AG-DLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRIN 78 (383)
Q Consensus 4 mki~i~a--GE~SGD~~--~a-~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~ 78 (383)
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~---~~~~~fl~k~~~e~-~~~---~--~~~~f~~~~------------~ 59 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKR---GFACLFLTKQDIEA-IIH---K--VYEGFKVLE------------G 59 (318)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHC---CCEEEEECCCCHHH-HHH---H--HHHHCCCEE------------E
T ss_conf 9579992687555751345599999999851---74688840662564-215---6--665104300------------2
Q ss_pred HHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCC
Q ss_conf 99861001288868985117765799998663013463111100221100366355799999864015677422320025
Q gi|254780767|r 79 QTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAWREGRARKMCAYINQVISILPFEKEVMQRLG 158 (383)
Q Consensus 79 ~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAWr~~R~k~~~~~~d~~~~ifpFE~~~f~k~~ 158 (383)
T Consensus 60 ~~~n~ik~~k~d~lI~-Dsygl~~dd~k~ik~e-~~~k~l~fD--------d~~~~~~~-d~d~ivN~~~~a~~~y~~v- 127 (318)
T COG3980 60 RGNNLIKEEKFDLLIF-DSYGLNADDFKLIKEE-AGSKILIFD--------DENAKSFK-DNDLIVNAILNANDYYGLV- 127 (318)
T ss_pred ECCCCCCCCCCCEEEE-ECCCCCHHHHHHHHHH-HCCCEEEEC--------CCCCCCHH-HHHHHHHHHHCCHHHCCCC-
T ss_conf 3364100366778999-4268887899998897-388179964--------77764225-6673545553511220536-
Q ss_pred CCCE-EECCC---CCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 5314-76388---2112210013558889761876556505998538743012305111899987640273512620166
Q gi|254780767|r 159 GPPT-TFVGH---PLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLVTV 234 (383)
Q Consensus 159 ~~~~-~fVGH---Pl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~~~ 234 (383)
T Consensus 128 ~~k~~~~lGp~y~~lr~eF~--~~r~~~~~r----~~r~ilI~lGGsDpk---~---lt~kvl~~L~~~~~nl~iV~gs~ 195 (318)
T COG3980 128 PNKTRYYLGPGYAPLRPEFY--ALREENTER----PKRDILITLGGSDPK---N---LTLKVLAELEQKNVNLHIVVGSS 195 (318)
T ss_pred CCCEEEEECCCCEECCHHHH--HHHHHHHHC----CHHEEEEECCCCCHH---H---HHHHHHHHHHCCCEEEEEEECCC
T ss_conf 76637996587114169999--868998635----311289971688724---4---59999998403570499994688
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEE-CCCCCCE-E-EEEECCCCCCE
Q ss_conf 3368899999960488850552055203578876355233115668887627530254-0577410-0-00102467610
Q gi|254780767|r 235 SSQENLVRCIVSKWDISPEIIIDKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSI-YKSEWIV-N-FFIFYIKTWTC 311 (383)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~-Yk~~~lt-~-~i~~lik~~~i 311 (383)
T Consensus 196 ~p~l~~l~k~~~~~-~~i~~~~~~~dma~LMke~d~aI~AaGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f--------- 265 (318)
T COG3980 196 NPTLKNLRKRAEKY-PNINLYIDTNDMAELMKEADLAISAAGSTLYEALLLGVPSLVLPLAENQIATAKEF--------- 265 (318)
T ss_pred CCCHHHHHHHHHHC-CCEEEEECCHHHHHHHHHCCHHEECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH---------
T ss_conf 85466788888657-88026862245899998603331446357999998269825876330178887789---------
Q ss_pred EEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 230244078426124205489899999999984498999999999
Q gi|254780767|r 312 ALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHG 356 (383)
Q Consensus 312 ~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~ 356 (383)
T Consensus 266 ------~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~~~rk~l~~~ 303 (318)
T COG3980 266 ------EALGIIKQLGYH-LKDLAKDYEILQIQKDYARRKNLSFG 303 (318)
T ss_pred ------HHCCCHHHCCCC-CCHHHHHHHHHHHHHCHHHHHHHHHC
T ss_conf ------866860022677-76187899999864077776422211