HHsearch alignment for GI: 254780767 and conserved domain: PRK05749
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.
Probab=99.46 E-value=4.5e-11 Score=93.05 Aligned_cols=328 Identities=16% Similarity=0.155 Sum_probs=188.4
Q ss_pred EEEEECCCCHHHHHH-HHHHHHHHHCCCCEEEE--E--ECCHHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHH
Q ss_conf 999976821478999-99999997389983999--9--717899947880650444531101367466459999999999
Q gi|254780767|r 6 IAVIAGEISGDLLAG-DLIKSLKEMVSYPINLV--G--VGGPSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQT 80 (383)
Q Consensus 6 i~i~aGE~SGD~~~a-~li~~Lk~~~~~~~~~~--g--iGG~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~ 80 (383)
T Consensus 52 IW~Haa-SvGE~~~~~pli~~l~~~~p-~~~ilvTt~T~sg~~~~~~~~---~~~~~~~ylP-~D----------~~~~~ 115 (423)
T PRK05749 52 IWFHAV-SVGETRAAIPLIRALRKRYP-DLPILVTTMTPTGSERAKALF---GDDVEHVYLP-YD----------LPFAV 115 (423)
T ss_pred EEEEEC-CHHHHHHHHHHHHHHHHHCC-CCEEEEEECCCHHHHHHHHHC---CCCEEEEEEC-CC----------CHHHH
T ss_conf 999828-79899999999999996299-974999837830999999866---8973799922-47----------87999
Q ss_pred HHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEC---CC---CCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 861001288868985117765799998663013463111100---22---110036635579999986401567742232
Q gi|254780767|r 81 VELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVC---PS---VWAWREGRARKMCAYINQVISILPFEKEVM 154 (383)
Q Consensus 81 ~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~---Pq---vWAWr~~R~k~~~~~~d~~~~ifpFE~~~f 154 (383)
T Consensus 116 ~rfl~~~~P~~~i~~E~E-iWPnli~~~~~~--~Ip~~liNaR~s~~S~~~y~~~~~~~~~~l~~~~~i~~qs~~~~~r~ 192 (423)
T PRK05749 116 RRFLRFWRPKLLIIMETE-LWPNLIAEAKKR--GIPLVLANARLSERSFKRYAKFKRFYRLLFKNIDLVLAQSEEDAERF 192 (423)
T ss_pred HHHHHHHCCCEEEEEECC-CCHHHHHHHHHC--CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHH
T ss_conf 999997398879986203-108899999627--88667652511633676667669999999974276652699999999
Q ss_pred HCCCCC--CEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEEEC
Q ss_conf 002553--147638821122100135588897618765565059985387430123051118999876402735126201
Q gi|254780767|r 155 QRLGGP--PTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFSLV 232 (383)
Q Consensus 155 ~k~~~~--~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~i~ 232 (383)
T Consensus 193 ~~l-G~~~~v~v~GnlKfd~~~~~~~~~~~~~~~~~~~~~-~v~vagSth~~EE~----iil~~~~~l~~~~~~~~lIia 266 (423)
T PRK05749 193 LAL-GAKNEVTVTGNLKFDIEIPPELAARAAALRRQLPNR-PVWIAASTHEGEEE----LVLDAHQALLKQFPNLLLILV 266 (423)
T ss_pred HHC-CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC-CEEEEEECCHHHHH----HHHHHHHHHHHCCCCCEEEEE
T ss_conf 975-999743876863224578711078899999981899-68999928876999----999999999740878289994
Q ss_pred C-CCCHHHHHHHHHHHCCC-------------CCEEEE--ECCCCHHHHHHHHHHHCCC------HHHHHHHHHHCCCEE
Q ss_conf 6-63368899999960488-------------850552--0552035788763552331------156688876275302
Q gi|254780767|r 233 T-VSSQENLVRCIVSKWDI-------------SPEIII--DKEQKKQVFMTCNAAMAAS------GTVILELALCGIPVV 290 (383)
Q Consensus 233 ~-~~~~~~~~~~~~~~~~~-------------~~~i~~--~~~~~~~~l~~sd~ai~~S------GTaTLE~al~g~P~I 290 (383)
T Consensus 267 PRHpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~Vli~Dt~GeL~~~Y~~a~iafvGGsf~~~GGHN~lEpa~~g~pvi 346 (423)
T PRK05749 267 PRHPERFKEVEELLKKAGLSYVRRSQGEAPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKIGGHNPLEPAAFGVPVI 346 (423)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHCCCCEE
T ss_conf 78776799999999967997798279999998872999888875889998578789827768889959799998399889
Q ss_pred EECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCC-----CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5405774100001024676102302440784261242054-----89899999999984498999999999999999838
Q gi|254780767|r 291 SIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSM-----IRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMN 365 (383)
Q Consensus 291 V~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~-----~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg 365 (383)
T Consensus 347 ~GP~~~nf---------------------~e~~~~L~~~g~~~~v~~~~eL~~~~~~ll~~~~~~~~~~~~a~~~v~~~- 404 (423)
T PRK05749 347 SGPHTFNF---------------------KEIFERLLQAGAAIQVEDAEDLAKAVSSLLTDPDAREAMGEAGVAFLKQN- 404 (423)
T ss_pred ECCCCCCH---------------------HHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC-
T ss_conf 99383277---------------------99999999789958968999999999999769999999999999999978-
Q ss_pred CCCCHHHHHHHHHHHHC
Q ss_conf 99998999999999861
Q gi|254780767|r 366 TKKPAGHMAAEIVLQVL 382 (383)
Q Consensus 366 ~~~~a~~~AA~~I~~~L 382 (383)
T Consensus 405 -~G-at~r~~~~i~~~L 419 (423)
T PRK05749 405 -RG-ALQRTLQLLKPYL 419 (423)
T ss_pred -CC-HHHHHHHHHHHHC
T ss_conf -47-9999999999763