HHsearch alignment for GI: 254780767 and conserved domain: TIGR00236
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA , . The protein from rat liver displays both epimerase and kinase activity .; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process.
Probab=95.71 E-value=0.19 Score=29.52 Aligned_cols=347 Identities=14% Similarity=0.072 Sum_probs=190.5
Q ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHCCCEEEEC---HH-HCCEEEHHHHH-HHHHHHHHHH
Q ss_conf 4599997682147899999999997389983999971-78999478806504---44-53110136746-6459999999
Q gi|254780767|r 4 LKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLVGVG-GPSLQKEGLVSLFD---FS-ELSVIGIMQVV-RHLPQFIFRI 77 (383)
Q Consensus 4 mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~giG-G~~m~~~G~~~~~~---~~-~l~v~G~~evl-~~~~~~~~~~ 77 (383)
T Consensus 1 ~~~~~~~g~~p~~~~~~p~~~~~~~~--p~~~~~~~~~~~h~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~l 78 (380)
T TIGR00236 1 LKVLIVLGTRPEAIKLAPLIRALLKD--PGIDWKVLHTGQHRDEEMLDQVLDLFSLPNPDYDLNIGSPGQTLGEITGGLL 78 (380)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 91255406762035665789998626--8852256750320014678999988622575444423576630477888888
Q ss_pred HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECC--CCCCCCCCCHHHHHHHHHHHCCC--CCCCHH-
Q ss_conf 9998610012888689851177657999986630134631111002--21100366355799999864015--677422-
Q gi|254780767|r 78 NQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCP--SVWAWREGRARKMCAYINQVISI--LPFEKE- 152 (383)
Q Consensus 78 ~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~P--qvWAWr~~R~k~~~~~~d~~~~i--fpFE~~- 152 (383)
T Consensus 79 ~~~~~~~~~~~p~~~~~~--gd~~~~~~~~l~~~~~~~~~gh~~~gl~~~~~~~p~p~~~~~~~~~~~~~~~~~p~~~~~ 156 (380)
T TIGR00236 79 EGLEELLLEEKPDVVLVQ--GDTTTTLAGALAAFYLQIPVGHVEAGLRTGDLYSPFPEELNRVLTGHIAKLHFAPTELAK 156 (380)
T ss_pred HHHHHHHHHCCCCEEEEE--CCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 767888641488678971--662146777887776530101332011124455776056777898877764203215667
Q ss_pred --HH-HCCCCCCEEECCCCCCCCCCCCCCHH-HHHHHCCCCC------CCCEEEEEECCCCCCHH--HHCCCHHHHHHHH
Q ss_conf --32-00255314763882112210013558-8897618765------56505998538743012--3051118999876
Q gi|254780767|r 153 --VM-QRLGGPPTTFVGHPLSSSPSILEVYS-QRNKQRNTPS------QWKKILLLPGSRAQEIY--KILPFFESAVASL 220 (383)
Q Consensus 153 --~f-~k~~~~~~~fVGHPl~d~~~~~~~~~-~~~~~~~~~~------~~~~I~llPGSR~~EI~--~~lP~~l~~~~~l 220 (383)
T Consensus 157 ~~l~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 236 (380)
T TIGR00236 157 ENLLREGVEPGKIFVTGNTVIDALLTNLEIAEPSSPVLSEFGENYPFVPDDRVLLLTLHRRENVGNPEPLENILEAILEI 236 (380)
T ss_pred HHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 77763055545057622056777877665421015502342256773204544465400110467601468999999998
Q ss_pred HHCCCCCEEEECCCCCHHHHHH--HHHHHCCCCCEEEEEC----CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECC
Q ss_conf 4027351262016633688999--9996048885055205----520357887635523311566888762753025405
Q gi|254780767|r 221 VKRNPFFRFSLVTVSSQENLVR--CIVSKWDISPEIIIDK----EQKKQVFMTCNAAMAASGTVILELALCGIPVVSIYK 294 (383)
Q Consensus 221 ~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~i~~~~----~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Yk 294 (383)
T Consensus 237 ~~~~~~~~~~~p~h~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~d~gg~~~~~~~~~~p~~~~~~ 316 (380)
T TIGR00236 237 LEEFPDVAIVFPVHPNPKVREPEFGLYKALGDAKRVFLIEPLGYLDFLLLLSNAYLILTDSGGLQEEAPSLGKPVLVLRD 316 (380)
T ss_pred HHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCEEEEEC
T ss_conf 74124303566214564210023104666325663577551347888887532416873477630011212774377503
Q ss_pred CCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 77410000102467610230244078426124205489899999999984498999999999999999838999989999
Q gi|254780767|r 295 SEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMA 374 (383)
Q Consensus 295 ~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~A 374 (383)
T Consensus 317 ~~~~p~~~--------------~~g~~~---l~--g~~~~~~~~~~~~~l~~p~~~~~~~~~----~~p~g~g~-~~~~~ 372 (380)
T TIGR00236 317 TTERPEAV--------------EAGTNK---LV--GTDKEKITKAAGRLLSDPDEYRKMSNA----ENPYGDGE-ASERI 372 (380)
T ss_pred CCCCCCHH--------------HCCCEE---EE--CCCHHHHHHHHHHHHCCHHHHHHHHHH----CCCCCCCH-HHHHH
T ss_conf 56664201--------------003200---10--466788999999873172678888641----26567741-46899
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780767|r 375 AEIV 378 (383)
Q Consensus 375 A~~I 378 (383)
T Consensus 373 ~~~~ 376 (380)
T TIGR00236 373 VEEL 376 (380)
T ss_pred HHHH
T ss_conf 9998