HHsearch alignment for GI: 254780767 and conserved domain: TIGR03088
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.61 E-value=1.9e-12 Score=102.04 Aligned_cols=313 Identities=14% Similarity=0.108 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEEC--C---HHHHHCCCEEEECHHHCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 7899999999997389983999971--7---8999478806504445311013674664599999999998610012888
Q gi|254780767|r 16 DLLAGDLIKSLKEMVSYPINLVGVG--G---PSLQKEGLVSLFDFSELSVIGIMQVVRHLPQFIFRINQTVELIVSSKPD 90 (383)
Q Consensus 16 D~~~a~li~~Lk~~~~~~~~~~giG--G---~~m~~~G~~~~~~~~~l~v~G~~evl~~~~~~~~~~~~~~~~i~~~~Pd 90 (383)
T Consensus 17 E~~~~~l~~~l~~~-~~~~~vi~~~~~~~~~~~~~~~~v~~~~-l~~~~-------~~----~~~~~~~l~~li~~~kpD 83 (374)
T TIGR03088 17 ENGLVNLINHLPAD-RYRHAVVALTEVSAFRKRIQRPDVAFYA-LHKQP-------GK----DVAVYPQLYRLLRQLRPD 83 (374)
T ss_pred HHHHHHHHHHHHHC-CCEEEEEEECCCCHHHHHHHHCCCEEEE-CCCCC-------CC----CHHHHHHHHHHHHHHCCC
T ss_conf 99999999978875-9939999978984578999868988999-07887-------64----799999999999983984
Q ss_pred EEEEECHHHHHHHHHHHHHHHCCCCCC-EEE------ECCCCCCCCCCCHHH-HHHHHHHHCCCCCCCHHHHHCCCCC--
Q ss_conf 689851177657999986630134631-111------002211003663557-9999986401567742232002553--
Q gi|254780767|r 91 VLLIVDNPDFTHRVAKRVRKKMPNLPI-INY------VCPSVWAWREGRARK-MCAYINQVISILPFEKEVMQRLGGP-- 160 (383)
Q Consensus 91 ~vi~iD~pgFnl~lak~lkk~~~~ipv-i~y------v~PqvWAWr~~R~k~-~~~~~d~~~~ifpFE~~~f~k~~~~-- 160 (383)
T Consensus 84 iIh~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~vs~~~~~~~~~~~~~~~ 159 (374)
T TIGR03088 84 IVHTRNLAALEAQLPAALA----GVPARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPP 159 (374)
T ss_pred EEEECCHHHHHHHHHHHHC----CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCH
T ss_conf 8986361169999999984----998899960787543743105899999999998568899915899999998709987
Q ss_pred -CEEECCCCCC-CCC-CCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCC----CCEEEECC
Q ss_conf -1476388211-221-0013558889761876556505998538743012305111899987640273----51262016
Q gi|254780767|r 161 -PTTFVGHPLS-SSP-SILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNP----FFRFSLVT 233 (383)
Q Consensus 161 -~~~fVGHPl~-d~~-~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~----~~~~~i~~ 233 (383)
T Consensus 160 ~ki~~I~Ngid~~~f~~~~~~~~~~~~~~~~~~~-~~~i~~vg-Rl~~~-Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G 236 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPILPPDFFADE-SVVVGTVG-RLQAV-KDQPTLVRAFALLVRQLPEGAERLRLVIVG 236 (374)
T ss_pred HHEEEECCCCCHHHCCCCCCCHHHHHHHCCCCCC-CEEEEEEE-ECEEE-CCHHHHHHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf 8989966877652158773106776543158987-76999966-34030-787999999999998677766888999981
Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEE--CCCCHHHHHHHHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECC
Q ss_conf 633688999999604888505520--552035788763552331-----1566888762753025405774100001024
Q gi|254780767|r 234 VSSQENLVRCIVSKWDISPEIIID--KEQKKQVFMTCNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYI 306 (383)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~l~~sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~li 306 (383)
T Consensus 237 ~G~~~~~l~~~i~~~~l~~~v~f~G~~~~~~~~~~~~Di~v~~S~~EGf~~~llEAma~g~P-vIasdvgg--------- 306 (374)
T TIGR03088 237 DGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLP-VIATAVGG--------- 306 (374)
T ss_pred CCCCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCC-EEECCCCC---------
T ss_conf 77659999999997187775853787468999999639003134434467799999975997-99918998---------
Q ss_pred CCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHCC
Q ss_conf 67610230244078426124205489899999999984498999999999999-9998389
Q gi|254780767|r 307 KTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFEN-LWDRMNT 366 (383)
Q Consensus 307 k~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~-~~~~Lg~ 366 (383)
T Consensus 307 ------~~eii~~~~~-G-~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~v~~~Fs~ 359 (374)
T TIGR03088 307 ------NPELVQHGVT-G-ALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred ------HHHHHCCCCC-E-EEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH
T ss_conf ------1898617986-8-997899999999999999779999999999999999987899