HHsearch alignment for GI: 254780767 and conserved domain: cd03816
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=96.29 E-value=0.046 Score=33.55 Aligned_cols=126 Identities=14% Similarity=0.222 Sum_probs=81.6
Q ss_pred HCCCHHHHHHHHHH------CCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE-----ECCCCHHHHHHHHHHHCC---
Q ss_conf 05111899987640------2735126201663368899999960488850552-----055203578876355233---
Q gi|254780767|r 209 ILPFFESAVASLVK------RNPFFRFSLVTVSSQENLVRCIVSKWDISPEIII-----DKEQKKQVFMTCNAAMAA--- 274 (383)
Q Consensus 209 ~lP~~l~~~~~l~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-----~~~~~~~~l~~sd~ai~~--- 274 (383)
T Consensus 246 DF~iLl~AL~~Yd~~~~~~~~~p~ll~iITGKGP~K~~y~~~I~~~~l~-~V~i~t~wL~~eDYP~lL~~ADLGVsLHtS 324 (415)
T cd03816 246 DFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLK-KVTIRTPWLSAEDYPKLLASADLGVSLHTS 324 (415)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCCCHHHHHHHHHCCCCCEEECCC
T ss_conf 5678999999997653214789987999968853089999999862888-219972578878899987415347242126
Q ss_pred -CHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCC------CHHHHHHHHHHHHCC-
Q ss_conf -115668887627530254057741000010246761023024407842612420548------989999999998449-
Q gi|254780767|r 275 -SGTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMI------RSEALVRWIERLSQD- 346 (383)
Q Consensus 275 -SGTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~------~~~~i~~~~~~ll~d- 346 (383)
T Consensus 325 SSG--------lDLPMKVVD--------------MfG~GlPV~A~~f~~i~ELVk~~~NG~~F~~~~eL~~~l~~l~~~~ 382 (415)
T cd03816 325 SSG--------LDLPMKVVD--------------MFGCGLPVCALDFKCIDELVKHGENGLVFGDSEELAEQLIDLLSNF 382 (415)
T ss_pred CCC--------CCCCHHHHH--------------HCCCCCCEEEECCCCHHHHHCCCCCCCEECCHHHHHHHHHHHHHCC
T ss_conf 876--------677702101--------------0268875798337517877226878766578999999999998559
Q ss_pred --HHHHHHHHHHH
Q ss_conf --89999999999
Q gi|254780767|r 347 --TLQRRAMLHGF 357 (383)
Q Consensus 347 --~~~r~~~~~~~ 357 (383)
T Consensus 383 p~~~~l~~lk~~a 395 (415)
T cd03816 383 PNRGKLNSLKKGA 395 (415)
T ss_pred CCHHHHHHHHHHH
T ss_conf 9668999999777