HHsearch alignment for GI: 254780767 and conserved domain: cd04946
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.78 E-value=5.4e-06 Score=59.51 Aligned_cols=225 Identities=13% Similarity=0.176 Sum_probs=135.2
Q ss_pred HHHHHHHHCCCCCCEE-EECCCCCCC------CCCCHHHHHHHHHHHCCCCCCCHHHHHCC-----CCCCEEECCCCCCC
Q ss_conf 9998663013463111-100221100------36635579999986401567742232002-----55314763882112
Q gi|254780767|r 104 VAKRVRKKMPNLPIIN-YVCPSVWAW------REGRARKMCAYINQVISILPFEKEVMQRL-----GGPPTTFVGHPLSS 171 (383)
Q Consensus 104 lak~lkk~~~~ipvi~-yv~PqvWAW------r~~R~k~~~~~~d~~~~ifpFE~~~f~k~-----~~~~~~fVGHPl~d 171 (383)
T Consensus 142 ~~all~~~~~~~~~~~taHg~Diy~~~~~~~~~~~~-~~~~~~~d~v~~vS~~~~~~l~~~~~~~~~ki~v~~~Gv~~~~ 220 (407)
T cd04946 142 ALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLR-RYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPG 220 (407)
T ss_pred HHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCHHHH-HHHHHHCCEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 999999863898299973030303330235304789-9998526879997778899998736997575899968967433
Q ss_pred CCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCEEE--ECCCCCHHHHHHHHHHHCC
Q ss_conf 21001355888976187655650599853874301230511189998764027351262--0166336889999996048
Q gi|254780767|r 172 SPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLVKRNPFFRFS--LVTVSSQENLVRCIVSKWD 249 (383)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~ 249 (383)
T Consensus 221 ~~---~----------~~~~~~~~~i~svgrlv~~Kg-~~~li~A~~~l~~~~~~~~~~~~iiG~G~~~~~l~~~~~~l~ 286 (407)
T cd04946 221 II---S----------KPSKDDTLRIVSCSYLVPVKR-VDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKP 286 (407)
T ss_pred CC---C----------CCCCCCCEEEEEEECCCHHCC-HHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCC
T ss_conf 46---7----------888789659999617730038-899999999998658993899999826812899999999779
Q ss_pred CCCEEEEECCC----CHHHHHH--HHHHHCCC-----HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEHHHC
Q ss_conf 88505520552----0357887--63552331-----1566888762753025405774100001024676102302440
Q gi|254780767|r 250 ISPEIIIDKEQ----KKQVFMT--CNAAMAAS-----GTVILELALCGIPVVSIYKSEWIVNFFIFYIKTWTCALPNLIV 318 (383)
Q Consensus 250 ~~~~i~~~~~~----~~~~l~~--sd~ai~~S-----GTaTLE~al~g~P~IV~Yk~~~lt~~i~~lik~~~i~LpNii~ 318 (383)
T Consensus 287 l~~~v~f~G~~~~~~v~~~~~~~~~d~~~~~s~~eg~p~~~~Eama~g~pvi~t-~~~---------------g~~e~v~ 350 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIAT-NVG---------------GTPEIVD 350 (407)
T ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEC-CCC---------------CCHHHEE
T ss_conf 988799927899699999998569619995663346417999999749999984-799---------------9841230
Q ss_pred CCC---CCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 784---261242054898999999999844989999999999999998
Q gi|254780767|r 319 DYP---LVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDR 363 (383)
Q Consensus 319 ~~~---ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~ 363 (383)
T Consensus 351 ~~~~g~l~~----~~~~~~~la~~i~~l~~~~~~~~~~~~~ar~~v~~ 394 (407)
T cd04946 351 NGGNGLLLS----KDPTPNELVSSLSKFIDNEEEYQTMREKAREKWEE 394 (407)
T ss_pred CCCCEEEEC----CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 698279968----99999999999999980999999999999999998