HHsearch alignment for GI: 254780767 and conserved domain: pfam05159

>pfam05159 Capsule_synth Capsule polysaccharide biosynthesis protein. This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS and LipB.
Probab=92.05  E-value=0.27  Score=28.45  Aligned_cols=98  Identities=18%  Similarity=0.218  Sum_probs=58.2

Q ss_pred             EEEEECCC--CCCHHHHCC---CHHHHHHHHHHCCCCCEEEECCCCCHHHH--HHHHHHHCCC-CCEEEEECCCCHHHHH
Q ss_conf             59985387--430123051---11899987640273512620166336889--9999960488-8505520552035788
Q gi|254780767|r  195 ILLLPGSR--AQEIYKILP---FFESAVASLVKRNPFFRFSLVTVSSQENL--VRCIVSKWDI-SPEIIIDKEQKKQVFM  266 (383)
Q Consensus       195 I~llPGSR--~~EI~~~lP---~~l~~~~~l~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~-~~~i~~~~~~~~~~l~  266 (383)
T Consensus       119 ~vLvplQv~~D~qI~~~s~~~~~~~~vl~sfa~~~Pda~lv~K~HP~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~Ll~  198 (268)
T pfam05159       119 IVLVPLQVFDDSSIRLGSAVIDFFLEVLESFAEENPDAQIIIKPHPDVLGGNKYGLITELPGLERVDVIVHDVNLISLLR  198 (268)
T ss_pred             EEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHH
T ss_conf             89993678746666369965899999999999878898399968987546776454575455688199936999999998


Q ss_pred             HHHHHHCCCHHHHHHHHHHCCCEEEE
Q ss_conf             76355233115668887627530254
Q gi|254780767|r  267 TCNAAMAASGTVILELALCGIPVVSI  292 (383)
Q Consensus       267 ~sd~ai~~SGTaTLE~al~g~P~IV~  292 (383)
T Consensus       199 ~~~~VvtvnSt~G~eALl~gkpV~~~  224 (268)
T pfam05159       199 HVDEVVTITSTVGFEALLLGKPVITL  224 (268)
T ss_pred             HCCEEEEECCHHHHHHHHCCCCEEEE
T ss_conf             57999996556899999859973894