HHsearch results for GI: 254780767 and protein with PDBid: 1psw_A
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=99.27 E-value=4.7e-11 Score=91.47 Aligned_cols=323 Identities=14% Similarity=0.051 Sum_probs=167.8
Q ss_pred CEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEECHHHC-CEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 459999768214789-9999999997389983999971789994788065044453-11013674664599999999998
Q gi|254780767|r 4 LKIAVIAGEISGDLL-AGDLIKSLKEMVSYPINLVGVGGPSLQKEGLVSLFDFSEL-SVIGIMQVVRHLPQFIFRINQTV 81 (383)
Q Consensus 4 mki~i~aGE~SGD~~-~a~li~~Lk~~~~~~~~~~giGG~~m~~~G~~~~~~~~~l-~v~G~~evl~~~~~~~~~~~~~~ 81 (383)
|||+|+....=||.. ...++++||+..| +.++.-++++..++. +.+...+ .++.+ ...+.........++.
T Consensus 1 MrILii~~~~iGD~i~~~p~i~~Lk~~~P-~~~I~~l~~~~~~~l----~~~~p~id~v~~~--~~~~~~~~~~~~~~~~ 73 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYP-QAIIDVMAPAWCRPL----LSRMPEVNEAIPM--PLGHGALEIGERRKLG 73 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHST-TCEEEEEECGGGHHH----HTTCTTEEEEEEC---------CHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECHHHHHH----HHCCCCCCEEEEE--CCCCCCCCHHHHHHHH
T ss_conf 96999918960999999999999998789-998999988508999----8519986789995--7853301378999999
Q ss_pred HHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC-----CCCCHHHHHHHHHHHCCCCCCCHHHHHC
Q ss_conf 61001288868985117765799998663013463111100221100-----3663557999998640156774223200
Q gi|254780767|r 82 ELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVWAW-----REGRARKMCAYINQVISILPFEKEVMQR 156 (383)
Q Consensus 82 ~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvWAW-----r~~R~k~~~~~~d~~~~ifpFE~~~f~k 156 (383)
+.++..++|.++..+..-.+.-++... +++..+......+.| +..+........+.-+.+... .....
T Consensus 74 ~~l~~~~~D~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 146 (348)
T 1psw_A 74 HSLREKRYDRAYVLPNSFKSALVPLFA-----GIPHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYIALAYD-KGIMR- 146 (348)
T ss_dssp HHTTTTTCSEEEECSCCSGGGHHHHHT-----TCSEEEEECTTTCTTTCTEEECCCTTTCCSHHHHHHHTTSC-GGGCS-
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHHHH-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCC-
T ss_conf 997541687764235430136778764-----16511132312232334443334433331478888989876-40222-
Q ss_pred CCCCCEEECCCCCCCC--CCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCC--HHHHHHHHHHCCCCCEEEEC
Q ss_conf 2553147638821122--1001355888976187655650599853874301230511--18999876402735126201
Q gi|254780767|r 157 LGGPPTTFVGHPLSSS--PSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILPF--FESAVASLVKRNPFFRFSLV 232 (383)
Q Consensus 157 ~~~~~~~fVGHPl~d~--~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP~--~l~~~~~l~~~~~~~~~~i~ 232 (383)
....+..|.... ..............+...++++|++.||++...- +.+|. +.+.++.+.++ +.++++.
T Consensus 147 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~-k~wp~~~~~~l~~~l~~~--~~~ivl~ 219 (348)
T 1psw_A 147 ----TAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPA-KRWPHYHYAELAKQLIDE--GYQVVLF 219 (348)
T ss_dssp ----SGGGSCSSCCCCCCCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGG-GSCCHHHHHHHHHHHHHT--TCEEEEC
T ss_pred ----CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHC-CCCCHHHHHHHHHHHHHC--CCCEECC
T ss_conf ----222455433576667898999999864124667874884587552113-689689899999998753--9831205
Q ss_pred CCCCHHHHHHHHHHHCCCC--CEEEE-----ECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCEEEE--E
Q ss_conf 6633688999999604888--50552-----0552035788763552331156688876275302540577410000--1
Q gi|254780767|r 233 TVSSQENLVRCIVSKWDIS--PEIII-----DKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSIYKSEWIVNFF--I 303 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~--~~i~~-----~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~Yk~~~lt~~i--~ 303 (383)
..++..+............ ..+.. .-.+.-.++..||+.|+..+...=-++++|+|+|++|..+....+. .
T Consensus 220 ~~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dtg~~HlAaalg~p~v~lfg~~~~~~~~P~~ 299 (348)
T 1psw_A 220 GSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLS 299 (348)
T ss_dssp CCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESSHHHHHHHHTTCCEEEEESSSCTTSSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHCCCC
T ss_conf 78467999999999853201454334457655899999995163675279759999998099989997899861408789
Q ss_pred ECCCCCCEEEEHHHCCCC----CCCHHHCCCCCHHHHHHHHHHHHCCHH
Q ss_conf 024676102302440784----261242054898999999999844989
Q gi|254780767|r 304 FYIKTWTCALPNLIVDYP----LVPEYFNSMIRSEALVRWIERLSQDTL 348 (383)
Q Consensus 304 ~lik~~~i~LpNii~~~~----ivPEliQ~~~~~~~i~~~~~~ll~d~~ 348 (383)
...++-+..++.-=..+. -..+.++ +.+|+.+.+++.++|.+.+
T Consensus 300 ~~~~vi~~~~~c~~c~~~~~~~~~~~c~~-~I~~~~V~~~l~~~L~~~~ 347 (348)
T 1psw_A 300 HKARVIRLITGYHKVRKGDAAEGYHQSLI-DITPQRVLEELNALLLQEE 347 (348)
T ss_dssp TTEEEEESSCC----------CCCCHHHH-TSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCHHHHC-CCCHHHHHHHHHHHHCCCC
T ss_conf 98699945898776668888887546573-8999999999999853388