HHsearch results for GI: 254780767 and protein with PDBid: 2gt1_A

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=98.53  E-value=1.2e-06  Score=62.34  Aligned_cols=301  Identities=9%  Similarity=0.034  Sum_probs=146.6

Q ss_pred             CEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEEECCHHHHHC-----CCEEEECHHHCCEEEHHHHHHHHHHHHHHH
Q ss_conf             459999768214789-99999999973899839999717899947-----880650444531101367466459999999
Q gi|254780767|r    4 LKIAVIAGEISGDLL-AGDLIKSLKEMVSYPINLVGVGGPSLQKE-----GLVSLFDFSELSVIGIMQVVRHLPQFIFRI   77 (383)
Q Consensus         4 mki~i~aGE~SGD~~-~a~li~~Lk~~~~~~~~~~giGG~~m~~~-----G~~~~~~~~~l~v~G~~evl~~~~~~~~~~   77 (383)
                      |||+|+.-..=||+. ...++++||+.+| +.++.-++.+..++.     .++.++....-   . +.-......++...
T Consensus         1 MKILiir~~~iGD~i~~~p~i~~Lk~~~P-~a~I~~l~~~~~~~l~~~~p~id~v~~~~~~---~-~~~~~~~~~~~~~~   75 (326)
T 2gt1_A            1 MRVLIVKTSSMGDVLHTLPALTDAQQAIP-GIKFDWVVEEGFAQIPSWHAAVERVIPVAIR---R-WRKAWFSAPIKAER   75 (326)
T ss_dssp             CEEEEECCCCHHHHHHHHHHHHHHHHHST-TCEEEEEEEGGGTHHHHTSTTEEEEEEECHH---H-HHTTTTSHHHHHHH
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECHHHHHHHHHCCCCCEEEEECCC---C-CCCCCCCCHHHHHH
T ss_conf             97999928980899999999999998789-9989999897589998519983589996640---0-02344421368999


Q ss_pred             HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCC---C--CC-----CCCHHHHHHHHHHHCCCC
Q ss_conf             9998610012888689851177657999986630134631111002211---0--03-----663557999998640156
Q gi|254780767|r   78 NQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVW---A--WR-----EGRARKMCAYINQVISIL  147 (383)
Q Consensus        78 ~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvW---A--Wr-----~~R~k~~~~~~d~~~~if  147 (383)
                      ..+.+.++..++|++|-.+.   +.+.+........+.+..+.-.-.-|   .  +.     ..+.....++.+.+...+
T Consensus        76 ~~~~~~l~~~~~d~~i~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  152 (326)
T 2gt1_A           76 KAFREALQAKNYDAVIDAQG---LVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSL  152 (326)
T ss_dssp             HHHHHHHHHSBCSEEEECSC---CHHHHHHTGGGSBSCEEEECTTTSSSGGGGGGCSEEECCCSSSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCEEEECCC---CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             99999971468888998864---067789999863021012354423442101012444454103779999988653203


Q ss_pred             CCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCC--CHHHHHHHHHHCCC
Q ss_conf             7742232002553147638821122100135588897618765565059985387430123051--11899987640273
Q gi|254780767|r  148 PFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILP--FFESAVASLVKRNP  225 (383)
Q Consensus       148 pFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP--~~l~~~~~l~~~~~  225 (383)
                      +.                  +.................... ...+.+.+.||+....  +.+|  .+.+.++.+.++.+
T Consensus       153 ~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~iv~~~~~~~~~--k~wp~~~~~~l~~~l~~~~~  211 (326)
T 2gt1_A          153 GY------------------SKPQTQGDYAIAQHFLTNLPT-DAGEYAVFLHATTRDD--KHWPEEHWRELIGLLADSGI  211 (326)
T ss_dssp             TC------------------CCCSSCCCCCCHHHHHTTCCT-TTTSEEEEECCCSSGG--GSCCHHHHHHHHHHTTTTCC
T ss_pred             CC------------------CCCCCCHHHHHHHHHHHHCCC-CCCCEEEEECCCCCCC--CCCCHHHHHHHHHHHHHCCC
T ss_conf             55------------------666640215666899874544-6687599933666776--77999999999999986288


Q ss_pred             CCEEEECCCCCHHHHHHHHHHHCCCCCEEE--EECCCCHHHHHHHHHHHCCC-HHHHHHHHHHCCCEEEECCC-CCCEEE
Q ss_conf             512620166336889999996048885055--20552035788763552331-15668887627530254057-741000
Q gi|254780767|r  226 FFRFSLVTVSSQENLVRCIVSKWDISPEII--IDKEQKKQVFMTCNAAMAAS-GTVILELALCGIPVVSIYKS-EWIVNF  301 (383)
Q Consensus       226 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~sd~ai~~S-GTaTLE~al~g~P~IV~Yk~-~~lt~~  301 (383)
                      .. +++...++.++..+......+ ..++.  ..-.+.-.+++.||+.|+.. |.+. =++++|+|+|++|-. ++-.|.
T Consensus       212 ~~-~l~~g~~~e~~~~~~i~~~~~-~i~l~~~~sl~el~~li~~a~l~I~~Dtg~~H-lAaa~~~p~i~lfg~t~p~~~~  288 (326)
T 2gt1_A          212 RI-KLPWGAPHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAKFVVSVDTGLSH-LTAALDRPNITVYGPTDPGLIG  288 (326)
T ss_dssp             EE-EECCSSHHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCSEEEEESSHHHH-HHHHTTCCEEEEESSSCHHHHC
T ss_pred             CC-CCCCCCHHHHHHHHHHHHCCC-EEEECCCCCHHHHHHHHHCCCEEEECCCHHHH-HHHHCCCCEEEEECCCCHHHHC
T ss_conf             52-014687788999999863355-16632752178999999659799989875999-9998699989998899998708


Q ss_pred             EEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCH
Q ss_conf             0102467610230244078426124205489899999999984498
Q gi|254780767|r  302 FIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDT  347 (383)
Q Consensus       302 i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~  347 (383)
                      -   ......    ++...    .-=-.+.+++.+.+.+.+.++..
T Consensus       289 P---~~~~~~----~~~~~----~~~~~~i~~~~V~~~~~~~l~~~  323 (326)
T 2gt1_A          289 G---YGKNQM----VCRAP----GNELSQLTANAVKQFIEENAEKA  323 (326)
T ss_dssp             C---CSSSEE----EEECG----GGCGGGCCHHHHHHHHHHTTTTC
T ss_pred             C---CCCCEE----EEECC----CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             8---999879----99899----97604599999999999998873