HHsearch results for GI: 254780767 and protein with PDBid: 2gt1_A
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=98.53 E-value=1.2e-06 Score=62.34 Aligned_cols=301 Identities=9% Similarity=0.034 Sum_probs=146.6
Q ss_pred CEEEEEECCCCHHHH-HHHHHHHHHHHCCCCEEEEEECCHHHHHC-----CCEEEECHHHCCEEEHHHHHHHHHHHHHHH
Q ss_conf 459999768214789-99999999973899839999717899947-----880650444531101367466459999999
Q gi|254780767|r 4 LKIAVIAGEISGDLL-AGDLIKSLKEMVSYPINLVGVGGPSLQKE-----GLVSLFDFSELSVIGIMQVVRHLPQFIFRI 77 (383)
Q Consensus 4 mki~i~aGE~SGD~~-~a~li~~Lk~~~~~~~~~~giGG~~m~~~-----G~~~~~~~~~l~v~G~~evl~~~~~~~~~~ 77 (383)
|||+|+.-..=||+. ...++++||+.+| +.++.-++.+..++. .++.++....- . +.-......++...
T Consensus 1 MKILiir~~~iGD~i~~~p~i~~Lk~~~P-~a~I~~l~~~~~~~l~~~~p~id~v~~~~~~---~-~~~~~~~~~~~~~~ 75 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIP-GIKFDWVVEEGFAQIPSWHAAVERVIPVAIR---R-WRKAWFSAPIKAER 75 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHST-TCEEEEEEEGGGTHHHHTSTTEEEEEEECHH---H-HHTTTTSHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECHHHHHHHHHCCCCCEEEEECCC---C-CCCCCCCCHHHHHH
T ss_conf 97999928980899999999999998789-9989999897589998519983589996640---0-02344421368999
Q ss_pred HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCC---C--CC-----CCCHHHHHHHHHHHCCCC
Q ss_conf 9998610012888689851177657999986630134631111002211---0--03-----663557999998640156
Q gi|254780767|r 78 NQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSVW---A--WR-----EGRARKMCAYINQVISIL 147 (383)
Q Consensus 78 ~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~PqvW---A--Wr-----~~R~k~~~~~~d~~~~if 147 (383)
..+.+.++..++|++|-.+. +.+.+........+.+..+.-.-.-| . +. ..+.....++.+.+...+
T Consensus 76 ~~~~~~l~~~~~d~~i~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 152 (326)
T 2gt1_A 76 KAFREALQAKNYDAVIDAQG---LVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSL 152 (326)
T ss_dssp HHHHHHHHHSBCSEEEECSC---CHHHHHHTGGGSBSCEEEECTTTSSSGGGGGGCSEEECCCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEECCC---CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999971468888998864---067789999863021012354423442101012444454103779999988653203
Q ss_pred CCCHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCC--CHHHHHHHHHHCCC
Q ss_conf 7742232002553147638821122100135588897618765565059985387430123051--11899987640273
Q gi|254780767|r 148 PFEKEVMQRLGGPPTTFVGHPLSSSPSILEVYSQRNKQRNTPSQWKKILLLPGSRAQEIYKILP--FFESAVASLVKRNP 225 (383)
Q Consensus 148 pFE~~~f~k~~~~~~~fVGHPl~d~~~~~~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~~lP--~~l~~~~~l~~~~~ 225 (383)
+. +.................... ...+.+.+.||+.... +.+| .+.+.++.+.++.+
T Consensus 153 ~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~iv~~~~~~~~~--k~wp~~~~~~l~~~l~~~~~ 211 (326)
T 2gt1_A 153 GY------------------SKPQTQGDYAIAQHFLTNLPT-DAGEYAVFLHATTRDD--KHWPEEHWRELIGLLADSGI 211 (326)
T ss_dssp TC------------------CCCSSCCCCCCHHHHHTTCCT-TTTSEEEEECCCSSGG--GSCCHHHHHHHHHHTTTTCC
T ss_pred CC------------------CCCCCCHHHHHHHHHHHHCCC-CCCCEEEEECCCCCCC--CCCCHHHHHHHHHHHHHCCC
T ss_conf 55------------------666640215666899874544-6687599933666776--77999999999999986288
Q ss_pred CCEEEECCCCCHHHHHHHHHHHCCCCCEEE--EECCCCHHHHHHHHHHHCCC-HHHHHHHHHHCCCEEEECCC-CCCEEE
Q ss_conf 512620166336889999996048885055--20552035788763552331-15668887627530254057-741000
Q gi|254780767|r 226 FFRFSLVTVSSQENLVRCIVSKWDISPEII--IDKEQKKQVFMTCNAAMAAS-GTVILELALCGIPVVSIYKS-EWIVNF 301 (383)
Q Consensus 226 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~sd~ai~~S-GTaTLE~al~g~P~IV~Yk~-~~lt~~ 301 (383)
.. +++...++.++..+......+ ..++. ..-.+.-.+++.||+.|+.. |.+. =++++|+|+|++|-. ++-.|.
T Consensus 212 ~~-~l~~g~~~e~~~~~~i~~~~~-~i~l~~~~sl~el~~li~~a~l~I~~Dtg~~H-lAaa~~~p~i~lfg~t~p~~~~ 288 (326)
T 2gt1_A 212 RI-KLPWGAPHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAKFVVSVDTGLSH-LTAALDRPNITVYGPTDPGLIG 288 (326)
T ss_dssp EE-EECCSSHHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCSEEEEESSHHHH-HHHHTTCCEEEEESSSCHHHHC
T ss_pred CC-CCCCCCHHHHHHHHHHHHCCC-EEEECCCCCHHHHHHHHHCCCEEEECCCHHHH-HHHHCCCCEEEEECCCCHHHHC
T ss_conf 52-014687788999999863355-16632752178999999659799989875999-9998699989998899998708
Q ss_pred EEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCH
Q ss_conf 0102467610230244078426124205489899999999984498
Q gi|254780767|r 302 FIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDT 347 (383)
Q Consensus 302 i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~ 347 (383)
- ...... ++... .-=-.+.+++.+.+.+.+.++..
T Consensus 289 P---~~~~~~----~~~~~----~~~~~~i~~~~V~~~~~~~l~~~ 323 (326)
T 2gt1_A 289 G---YGKNQM----VCRAP----GNELSQLTANAVKQFIEENAEKA 323 (326)
T ss_dssp C---CSSSEE----EEECG----GGCGGGCCHHHHHHHHHHTTTTC
T ss_pred C---CCCCEE----EEECC----CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8---999879----99899----97604599999999999998873