HHsearch results for GI: 254780767 and protein with PDBid: 3dzc_A
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase, center for structural genomics of infectious diseases; 2.35A {Vibrio cholerae}
Probab=99.20 E-value=5e-08 Score=71.48 Aligned_cols=340 Identities=14% Similarity=0.079 Sum_probs=180.3
Q ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH--HHH-----CCCEEEECHHHCCEEEHHHHHHHHHH
Q ss_conf 874-599997682147899999999997389983999-971789--994-----78806504445311013674664599
Q gi|254780767|r 2 NSL-KIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS--LQK-----EGLVSLFDFSELSVIGIMQVVRHLPQ 72 (383)
Q Consensus 2 ~~m-ki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~--m~~-----~G~~~~~~~~~l~v~G~~evl~~~~~ 72 (383)
+.| ||++++|--+-=...+.|+++|++. +++++. -+.|.+ |.. -|.+.-++ +.+..-.+.+. ..
T Consensus 23 ~~MkKI~~v~GtR~e~~kl~pli~~l~~~--~~~~~~li~TGqH~d~~~~~~~~~~i~~d~~---~~~~~~~~s~~--~~ 95 (396)
T 3dzc_A 23 NAMKKVLIVFGTRPEAIKMAPLVQQLCQD--NRFVAKVCVTGQHREMLDQVLELFSITPDFD---LNIMEPGQTLN--GV 95 (396)
T ss_dssp -CCEEEEEEECSHHHHHHHHHHHHHHHHC--TTEEEEEEECCSSSHHHHHHHHHTTCCCSEE---CCCCCTTCCHH--HH
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHHHC--CCCCEEEEEECCCHHHHHHHHHHCCCCCCEE---ECCCCCCCCHH--HH
T ss_conf 59861899997037099999999999738--9987799990899889999998549888732---21588999899--99
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCC-CCCCC-CCHHHHHHHHHHHCCC-CCC
Q ss_conf 99999999861001288868985117765799998663013463111100221-10036-6355799999864015-677
Q gi|254780767|r 73 FIFRINQTVELIVSSKPDVLLIVDNPDFTHRVAKRVRKKMPNLPIINYVCPSV-WAWRE-GRARKMCAYINQVISI-LPF 149 (383)
Q Consensus 73 ~~~~~~~~~~~i~~~~Pd~vi~iD~pgFnl~lak~lkk~~~~ipvi~yv~Pqv-WAWr~-~R~k~~~~~~d~~~~i-fpF 149 (383)
+-.....+-+.+.+.+||+|+.. .|=+=-+|-.+-....+||++|.=+=-. --|.+ .-=...+..+|++..+ |+-
T Consensus 96 ~~~~i~~~~~~~~~~kpD~VlV~--GDr~e~la~a~aa~~~~ipi~HiegG~rs~~~~~~~pde~~R~~isklS~lhf~~ 173 (396)
T 3dzc_A 96 TSKILLGMQQVLSSEQPDVVLVH--GDTATTFAASLAAYYQQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAP 173 (396)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEE--TTSHHHHHHHHHHHTTTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECC
T ss_conf 99999999999997199999995--8886225489999982997899971265468877982677663235420499515
Q ss_pred CHHHHHCC-----CCCCEEECCCCCCCCCCCCCC--------HHHHHHH-CCCCCCCCEEEEEECCCCCCHHHHCCCHHH
Q ss_conf 42232002-----553147638821122100135--------5888976-187655650599853874301230511189
Q gi|254780767|r 150 EKEVMQRL-----GGPPTTFVGHPLSSSPSILEV--------YSQRNKQ-RNTPSQWKKILLLPGSRAQEIYKILPFFES 215 (383)
Q Consensus 150 E~~~f~k~-----~~~~~~fVGHPl~d~~~~~~~--------~~~~~~~-~~~~~~~~~I~llPGSR~~EI~~~lP~~l~ 215 (383)
.+...++. ..-++..||+|..|.+..... ....... ..++..++.+++..=-+.++ ...+--+..
T Consensus 174 te~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLvt~Hr~~n~-~~~~~~~~~ 252 (396)
T 3dzc_A 174 TDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESF-GGGFERICQ 252 (396)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCC-TTHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC-CHHHHHHHH
T ss_conf 3568999987078854440114430778998876403426766667654344356787799973621022-058999999
Q ss_pred HHHHHHHCCCCCEEEECCCCCHHH--HHHHHHHHCCCCCEEEEE----CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCE
Q ss_conf 998764027351262016633688--999999604888505520----55203578876355233115668887627530
Q gi|254780767|r 216 AVASLVKRNPFFRFSLVTVSSQEN--LVRCIVSKWDISPEIIID----KEQKKQVFMTCNAAMAASGTVILELALCGIPV 289 (383)
Q Consensus 216 ~~~~l~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~~~----~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~ 289 (383)
....+....++..+++|..+.... ....... ...++.+. ..+...++..|++.|+=||+.-.|++.+|+|+
T Consensus 253 ~~~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~---~~~ni~~i~~l~~~~fl~ll~~a~~vIgnSssg~~EA~~lg~P~ 329 (396)
T 3dzc_A 253 ALITTAEQHPECQILYPVHLNPNVREPVNKLLK---GVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPV 329 (396)
T ss_dssp HHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTT---TCTTEEEECCCCHHHHHHHHHHCSEEEESCSGGGTTGGGGTCCE
T ss_pred HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH---CCCCCEECCCCCHHHHHHHHHHCEEEECCCHHHHHHHHHHCCCE
T ss_conf 999998626456503313678513567898862---46554005887689999998503588736455788898728988
Q ss_pred EEEC-CCCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 2540-577410000102467610230244078426124205489899999999984498999999999999999838999
Q gi|254780767|r 290 VSIY-KSEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKK 368 (383)
Q Consensus 290 IV~Y-k~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~ 368 (383)
|++= ++-|-.. +....+-+ -..+.+.|.+++.++++++..++.+. +...-.| .|
T Consensus 330 Inir~~ter~e~-----v~~~~~il---------------v~~d~~~I~~ai~~~l~~~~~~~~~~----~~~npYG-dG 384 (396)
T 3dzc_A 330 LVMRETTERPEA-----VAAGTVKL---------------VGTNQQQICDALSLLLTDPQAYQAMS----QAHNPYG-DG 384 (396)
T ss_dssp EECCSSCSCHHH-----HHHTSEEE---------------CTTCHHHHHHHHHHHHHCHHHHHHHH----TSCCTTC-CS
T ss_pred EECCCCCCCCCC-----CCCCCEEE---------------CCCCHHHHHHHHHHHHCCHHHHHHCC----CCCCCCC-CC
T ss_conf 965776657102-----01780697---------------78999999999999963988886305----4789897-98
Q ss_pred CHHHHHHHHHH
Q ss_conf 98999999999
Q gi|254780767|r 369 PAGHMAAEIVL 379 (383)
Q Consensus 369 ~a~~~AA~~I~ 379 (383)
.|+++.++++.
T Consensus 385 ~as~rIv~iL~ 395 (396)
T 3dzc_A 385 KACQRIADILA 395 (396)
T ss_dssp CHHHHHHHHHH
T ss_pred HHHHHHHHHHC
T ss_conf 59999999963