HHsearch results for GI: 254780767 and protein with PDBid: 3l7i_A

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.49  E-value=0.00055  Score=44.82  Aligned_cols=222  Identities=12%  Similarity=0.088  Sum_probs=120.1

Q ss_pred             HHHHCCCCCCCHHHHHCCCC---CCEEECCCCCCCCCCCC----CCHHHHHHHCCCCCCCCEEEEEECCCCCCHHH----
Q ss_conf             98640156774223200255---31476388211221001----35588897618765565059985387430123----
Q gi|254780767|r  140 INQVISILPFEKEVMQRLGG---PPTTFVGHPLSSSPSIL----EVYSQRNKQRNTPSQWKKILLLPGSRAQEIYK----  208 (383)
Q Consensus       140 ~d~~~~ifpFE~~~f~k~~~---~~~~fVGHPl~d~~~~~----~~~~~~~~~~~~~~~~~~I~llPGSR~~EI~~----  208 (383)
                      .|.+++-=+++.+.|.+.-+   -++.-+|.|-.|.....    ......++.++++.++++|+.+|-=|..+...    
T Consensus       479 ~d~~~~~s~~~~~~~~~~f~~~~~~v~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kkvILy~PT~R~~~~~~~~~~  558 (729)
T 3l7i_A          479 WDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKY  558 (729)
T ss_dssp             CSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSS
T ss_pred             CCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECEEECCCCCCCCHH
T ss_conf             89899888899999999838996607783657607875421048999999986699966707999030205665663100


Q ss_pred             --HCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEE--EECCCCHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             --05111899987640273512620166336889999996048885055--20552035788763552331156688876
Q gi|254780767|r  209 --ILPFFESAVASLVKRNPFFRFSLVTVSSQENLVRCIVSKWDISPEII--IDKEQKKQVFMTCNAAMAASGTVILELAL  284 (383)
Q Consensus       209 --~lP~~l~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~l~~sd~ai~~SGTaTLE~al  284 (383)
                        ..+..++.+.+..+  .++.+++-.-|..    ............+.  ....+.+++|..||+.|+==-.+..|.++
T Consensus       559 ~~~~~~~~~~l~~~l~--~~~~li~k~Hp~~----~~~~~~~~~~~~~~~~~~~~d~~~ll~~sD~lITDYSSv~fd~~~  632 (729)
T 3l7i_A          559 LFELKIDLDNLYKELG--DDYVILLRMHYLI----SNALDLSGYENFAIDVSNYNDVSELFLISDCLITDYSSVMFDYGI  632 (729)
T ss_dssp             CCCCTTCHHHHHHHHT--TTEEEEECCCHHH----HTTCCCTTCTTTEEECTTCSCHHHHHHTCSEEEESSCTHHHHHGG
T ss_pred             HHHHHHHHHHHHHHCC--CCCEEEEECCCCH----HHCCCCCCCCCEEEECCCCCCHHHHHHHHCEEEECHHHHHHHHHH
T ss_conf             1233667999999758--9948999768232----311443457885871899868999999834999737879999999


Q ss_pred             HCCCEEEECCCCCCEEEE-EECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             275302540577410000-1024676102302440784261242054898999999999844989999999999999998
Q gi|254780767|r  285 CGIPVVSIYKSEWIVNFF-IFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDR  363 (383)
Q Consensus       285 ~g~P~IV~Yk~~~lt~~i-~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~  363 (383)
                      ++.| |+.|.-.+=.|.- .|-.   |.......-| +++       -+.+.|.+++.....+.+   +..+..++..++
T Consensus       633 l~kP-ii~~~~D~~~Y~~~~rg~---y~d~~~~~pG-~~~-------~~~~eL~~~l~~~~~~~~---~~~~~~~~~~~~  697 (729)
T 3l7i_A          633 LKRP-QFFFAYDIDKYDKGLRGF---YMNYMEDLPG-PIY-------TEPYGLAKELKNLDKVQQ---QYQEKIDAFYDR  697 (729)
T ss_dssp             GCCC-EEEECTTTTTTTSSCCSB---SSCTTSSSSS-CEE-------SSHHHHHHHHTTHHHHHH---HTHHHHHHHHHH
T ss_pred             HCCC-EEEECCCHHHHHHHCCCC---CCCHHHCCCC-CEE-------CCHHHHHHHHHHHHHCCH---HHHHHHHHHHHH
T ss_conf             7898-999888899986435886---0178782997-768-------989999999972531666---789999999999


Q ss_pred             HC--CCCCHHHHHHHHHHHHC
Q ss_conf             38--99998999999999861
Q gi|254780767|r  364 MN--TKKPAGHMAAEIVLQVL  382 (383)
Q Consensus       364 Lg--~~~~a~~~AA~~I~~~L  382 (383)
                      ..  ..|.++++..+.|.+.+
T Consensus       698 ~~~~~dg~~~~ri~~~i~~~~  718 (729)
T 3l7i_A          698 FCSVDNGKASQYIGDLIHKDI  718 (729)
T ss_dssp             HSTTCCSCHHHHHHHHHHHHH
T ss_pred             HCCCCCCHHHHHHHHHHHHHH
T ss_conf             589989939999999999987