HHsearch results for GI: 254780767 and protein with PDBid: 3ot5_A
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.55 E-value=1.1e-12 Score=102.33 Aligned_cols=342 Identities=13% Similarity=0.096 Sum_probs=199.1
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEE-EECCHH-------HHHCCCEEEECHHHCCEEEHHHHHHHHHH
Q ss_conf 9874599997682147899999999997389983999-971789-------99478806504445311013674664599
Q gi|254780767|r 1 MNSLKIAVIAGEISGDLLAGDLIKSLKEMVSYPINLV-GVGGPS-------LQKEGLVSLFDFSELSVIGIMQVVRHLPQ 72 (383)
Q Consensus 1 m~~mki~i~aGE~SGD~~~a~li~~Lk~~~~~~~~~~-giGG~~-------m~~~G~~~~~~~~~l~v~G~~evl~~~~~ 72 (383)
|.+|||++++|--.-=..-+.|+++|++. +.+++.. -+.|.+ .+..|++.-++ ++++.-.+.+. -.
T Consensus 25 M~kmKIl~v~GTRpe~ikl~pli~~l~~~-~~~~~~~li~TGqH~d~~~~~~~~~~i~~d~~---l~i~~~~~~~~--~~ 98 (403)
T 3ot5_A 25 MAKIKVMSIFGTRPEAIKMAPLVLALEKE-PETFESTVVITAQHREMLDQVLEIFDIKPDID---LDIMKKGQTLA--EI 98 (403)
T ss_dssp -CCEEEEEEECSHHHHHHHHHHHHHHHTC-TTTEEEEEEECC-----CHHHHHHTTCCCSEE---CCCCC-CCCHH--HH
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCHHHHHHHHHHCCCCCCEE---EECCCCCCCHH--HH
T ss_conf 86855999997368499999999999838-88888799990799789999998619998833---43488999999--99
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEE--CHHHHHHHHHHHHHHHCCCCCCEEEEC-CCCCCCCCCCH-HHHHHHHHHHCCC-C
Q ss_conf 99999999861001288868985--117765799998663013463111100-22110036635-5799999864015-6
Q gi|254780767|r 73 FIFRINQTVELIVSSKPDVLLIV--DNPDFTHRVAKRVRKKMPNLPIINYVC-PSVWAWREGRA-RKMCAYINQVISI-L 147 (383)
Q Consensus 73 ~~~~~~~~~~~i~~~~Pd~vi~i--D~pgFnl~lak~lkk~~~~ipvi~yv~-PqvWAWr~~R~-k~~~~~~d~~~~i-f 147 (383)
+-+.+..+-+.+.+.+||+|+.. .+--+---+|.+ ..+||++|.-+ -.-|-|.++-. ...+..+|++..+ |
T Consensus 99 ~~~~i~~~~~~~~~~kPD~vlV~GDr~~~la~alaa~----~~~Ipi~HiegG~rs~~~~~~~peE~~R~~i~kls~~hf 174 (403)
T 3ot5_A 99 TSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATF----YQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHF 174 (403)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHH----HTTCEEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH----HHCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEE
T ss_conf 9999999999999739999999688804899999999----819978999646656776789807876412463005998
Q ss_pred CCCHHHHHCC--CCC---CEEECCCCCCCCCCCCCCHHHH-HHHCCCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHH
Q ss_conf 7742232002--553---1476388211221001355888-976187655650599853874301230511189998764
Q gi|254780767|r 148 PFEKEVMQRL--GGP---PTTFVGHPLSSSPSILEVYSQR-NKQRNTPSQWKKILLLPGSRAQEIYKILPFFESAVASLV 221 (383)
Q Consensus 148 pFE~~~f~k~--~~~---~~~fVGHPl~d~~~~~~~~~~~-~~~~~~~~~~~~I~llPGSR~~EI~~~lP~~l~~~~~l~ 221 (383)
+--+...++. .|. ++..||+|..|.+......... .....+. ++...++---|...+...+..+.+++..+.
T Consensus 175 ~~t~~~~~~L~~~G~~~~~I~~vG~~~iD~l~~~~~~~~~~~~~~~~~--~~~~ilvt~Hr~en~~~~~~~~~~~~~~~~ 252 (403)
T 3ot5_A 175 SPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLG--DNRLILMTAHRRENLGEPMQGMFEAVREIV 252 (403)
T ss_dssp ESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSCT--TCEEEEECCCCHHHHTTHHHHHHHHHHHHH
T ss_pred EECHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHCC--CCCEEEEECCCCHHCCCHHHHHHHHHHHHH
T ss_conf 502787768875289966089968850888998787755073545345--685799985652220361678889988887
Q ss_pred HCCCCCEEEECCCCCHHH--HHHHHHHHCCCCCEEEE----ECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEE-CC
Q ss_conf 027351262016633688--99999960488850552----055203578876355233115668887627530254-05
Q gi|254780767|r 222 KRNPFFRFSLVTVSSQEN--LVRCIVSKWDISPEIII----DKEQKKQVFMTCNAAMAASGTVILELALCGIPVVSI-YK 294 (383)
Q Consensus 222 ~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~i~~----~~~~~~~~l~~sd~ai~~SGTaTLE~al~g~P~IV~-Yk 294 (383)
+..++..+++|..+.... ........ ..++.+ ...+...+++.|+++++=||+.-.|++.+|+|+|++ -.
T Consensus 253 ~~~~~~~ii~p~~~~~~~~~~~~~~~~~---~~ni~~i~~l~~~~fl~ll~~a~~vIgdSss~~~EA~~lg~P~Inir~~ 329 (403)
T 3ot5_A 253 ESREDTELVYPMHLNPAVREKAMAILGG---HERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQEEAPGMGVPVLVLRDT 329 (403)
T ss_dssp HHCTTEEEEEECCSCHHHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHHEEEEEECCHHHHHHGGGTTCCEEECCSS
T ss_pred HHCCCEEEEEECCCCHHHHHHHHHHHCC---CCCCEECCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCEEEECCC
T ss_conf 5057248999547750221123333025---6410003772288899998642899966702777788609978980787
Q ss_pred CCCCEEEEEECCCCCCEEEEHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 77410000102467610230244078426124205489899999999984498999999999999999838999989999
Q gi|254780767|r 295 SEWIVNFFIFYIKTWTCALPNLIVDYPLVPEYFNSMIRSEALVRWIERLSQDTLQRRAMLHGFENLWDRMNTKKPAGHMA 374 (383)
Q Consensus 295 ~~~lt~~i~~lik~~~i~LpNii~~~~ivPEliQ~~~~~~~i~~~~~~ll~d~~~r~~~~~~~~~~~~~Lg~~~~a~~~A 374 (383)
+.+-... -.|.-+. ...+.+++..++.+++.++..+.++. +...-.|. |.++++.
T Consensus 330 tERqeg~---------------~~g~~il-----v~~~~~~ii~~~~~~l~~~~~~~k~~----~~~npYGd-G~as~rI 384 (403)
T 3ot5_A 330 TERPEGI---------------EAGTLKL-----IGTNKENLIKEALDLLDNKESHDKMA----QAANPYGD-GFAANRI 384 (403)
T ss_dssp CSCHHHH---------------HHTSEEE-----CCSCHHHHHHHHHHHHHCHHHHHHHH----HSCCTTCC-SCHHHHH
T ss_pred CCCHHHH---------------HCCEEEE-----CCCCHHHHHHHHHHHHHCHHHHHHHC----CCCCCCCC-CHHHHHH
T ss_conf 7687368---------------5481599-----58999999999999985968776412----37899989-8699999
Q ss_pred HHHHHHHC
Q ss_conf 99999861
Q gi|254780767|r 375 AEIVLQVL 382 (383)
Q Consensus 375 A~~I~~~L 382 (383)
.++|.+++
T Consensus 385 v~iL~~~~ 392 (403)
T 3ot5_A 385 LAAIKSHF 392 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999861