HHsearch alignment for GI: 254780768 and conserved domain: COG3494
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00 E-value=0 Score=552.81 Aligned_cols=275 Identities=47% Similarity=0.738 Sum_probs=266.0
Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
Q ss_conf 73999977980389999999978997899995486673103885678738999999999986495406770242321000
Q gi|254780768|r 2 KRLLIIAGSGMLPYYVAKAARLKNDEPVIASVLNECSFDWQDFECRELPLGDFCVLRSILHQYNIGRIVVAGAIDRRPNV 81 (281)
Q Consensus 2 ~kigIIAG~G~LP~~ia~~~~~~g~~~~ii~l~~~~~~~~~~~~~~~~~ig~ig~li~~Lk~~~i~~ivmaG~V~krP~~ 81 (281)
T Consensus 5 ~klglIaG~G~LP~~va~~a~~~G~~~~ii~l~~eaD~~~~~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G~v~~Rp~~ 84 (279)
T COG3494 5 GKLGLIAGNGSLPLEVAENARNQGYAPFIIGLRGEADPELKEFEYKEVSIGEVGKLIKLLKTEGVDRVVLAGGVERRPNF 84 (279)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH
T ss_conf 60799955986758999999867998279983575665552588707757879999999998488689996452568534
Q ss_pred HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 11102603578999999875104803589999999997697482112225242035433455465323478899899999
Q gi|254780768|r 82 QDLCFSIKDSLRISKMIWQLVSGGNAAILKASIDLLESYGVSVVGAHEIVPELLVQVGSLGTCVPNRDVKRDILAAMKSA 161 (281)
Q Consensus 82 ~~l~~D~~~~~~l~k~l~~~~~~gDd~iL~~i~~~fe~~G~~vi~~~~~l~~ll~~~G~l~~~~p~~~~~~dI~~g~~i~ 161 (281)
T Consensus 85 ~~L~~d~~~l~~lp~Iv~~~-~~gDDaLLk~vi~~~E~~GfKvigahei~~~ll~~~g~lt~~~P~~~d~~dI~~g~~aA 163 (279)
T COG3494 85 RDLRPDKIGLAVLPKIVEAL-IRGDDALLKAVIDFIESRGFKVIGAHEIVPGLLAETGPLTKKEPDNEDLRDIELGIEAA 163 (279)
T ss_pred HHCCCCCCHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 54064300146779999986-14967899999999986586885576611110257876567888722488999999999
Q ss_pred HHHCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHC
Q ss_conf 97332672259998197488962534217999999975431234566771899934888753121066279999999984
Q gi|254780768|r 162 EALSELDVGQSAVSIGGRVVALEGIEGTDSMLQRIVDCRNNGRILAGKSGVLVKMCKSQQDMRADLPSIGAKTVQNVIKA 241 (281)
Q Consensus 162 ~~l~~~DiGQsvVv~~g~ViaiEa~eGTD~mi~R~~~~~~~~~~~~~~~~ilvK~~K~~QD~r~DlP~IG~~Ti~~~~~a 241 (281)
T Consensus 164 ~~lg~lDVGQ~aV~~~g~vvAvEg~EGTd~ml~R~a~lr~~gr-~~rr~gvLvK~aKp~QD~R~DlPtIG~~Ti~~a~ka 242 (279)
T COG3494 164 NALGALDVGQGAVVVGGRVVAVEGAEGTDAMLRRVADLRKAGR-AERRGGVLVKMAKPQQDERADLPTIGPNTIENAAKA 242 (279)
T ss_pred HHHCCCCCCCEEEEECCEEEEEEECCCHHHHHHHHHHHHHCCC-CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 8742034565469967769999603264999999998764355-565687899826888543136875588999999975
Q ss_pred CCEEEEEECCCEEEECHHHHHHHHHHCCCEEEEECHH
Q ss_conf 9909999739779985899999999879689995775
Q gi|254780768|r 242 GLAGIALEAGKSLVLEKELVKKHADEAGIFVCGIDRE 278 (281)
Q Consensus 242 g~~giaiea~~~lild~~~~i~~a~~~~i~i~g~~~~ 278 (281)
T Consensus 243 GlaGIaieagr~lile~e~~l~~Ank~giFI~gi~~~ 279 (279)
T COG3494 243 GLAGIAIEAGRVLILEREATLKLANKLGIFIVGIDRD 279 (279)
T ss_pred CCCCEEEECCCEEEECCHHHHHHHHHCCEEEEEECCC
T ss_conf 8211350039379965388898676578389961479