HHsearch alignment for GI: 254780770 and conserved domain: PRK11688
>PRK11688 hypothetical protein; Provisional.
Probab=94.66 E-value=0.37 Score=27.26 Aligned_cols=129 Identities=16% Similarity=0.145 Sum_probs=70.6
Q ss_pred HHHHHCCCCCCEE--EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCC-HHH--HHHHHHHHHHHHHHHCCCCC-
Q ss_conf 8998479997505--47899998469749999982688831313479995022-566--99998634634544329977-
Q gi|254780770|r 15 ELMRFLPHRYPFL--LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMP-GVL--ILEGMAQTAGAICAIHNGFD- 88 (161)
Q Consensus 15 eI~~~lPhr~Pfl--~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmP-GvL--liE~maQ~~~~l~~~~~~~~- 88 (161)
T Consensus 12 ~~~~~F~~~iPf~~~LGl~v~~~~~g-~~~l~lp~r--~eli-gn~~-~g~lHGGVi~allD~a~g~Aa~~~~~~~~~~~ 86 (154)
T PRK11688 12 LVGEIFVYHMPFNRLLGLKLERYEPE-FVELRFKMQ--PELV-GNIA-QSILHGGVIASVLDVAGGLVAVGGILARHEDI 86 (154)
T ss_pred HHHHHHHHHCCHHHHCCCEEEEEECC-EEEEEEECC--HHHC-CCCC-CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999887399889729899998599-799998688--8983-8987-77786788999999988999997403204775
Q ss_pred --CCEEEEE---EECC-CCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEE-CCEEEEEEEEEEEE
Q ss_conf --6302677---5236-413600221288899999999720777999999999-99999989999998
Q gi|254780770|r 89 --QYAPPYL---MSID-KARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKV-ENTVVAEAEICAMV 149 (161)
Q Consensus 89 --~~~~~~l---~~i~-~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v-~~~~va~a~l~~~i 149 (161)
T Consensus 87 ~~~~~~~~~~~~aTidl~v~yLrpa~-g~~l~a~a~v~r~Gr~va~~~~~~~~~~g~lvA~a~~tf~v 153 (154)
T PRK11688 87 SEEELQQRLSRLGTIDLRVDYLRPGR-GERFTATASVLRAGNKVAVARMELHNEQGTHIASGTATYMV 153 (154)
T ss_pred CHHHHHHCCCCCCEEEEEEEEECCCC-CCEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEE
T ss_conf 44565420355304786631104689-98089999999717979999999998999889999999963