HHsearch alignment for GI: 254780770 and conserved domain: TIGR02286
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD; InterPro: IPR011973 This members of this family belong to the thioesterase superfamily IPR006683 from INTERPRO, and are nearly always found adjacent to other genes of the phenylacetic acid degradation pathway . Their function is currently unknown, but a role as thioesterases is suggested..
Probab=96.68 E-value=0.023 Score=34.51 Aligned_cols=99 Identities=20% Similarity=0.192 Sum_probs=70.0
Q ss_pred EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 99998469749999982688831313479995022566999986346345443299776302677523641360022128
Q gi|254780770|r 31 KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPG 110 (161)
Q Consensus 31 ~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PG 110 (161)
T Consensus 7 ~i~~~~pg-~A~v~mtVr~--dmlNgHgtaH----GG-flF~LAD~AFA~aC--Ns~~~-~a--VA~~~~idflrP~~~G 73 (115)
T TIGR02286 7 KILELGPG-EARVAMTVRE--DMLNGHGTAH----GG-FLFALADSAFAYAC--NSYGD-AA--VAAQCTIDFLRPARAG 73 (115)
T ss_pred EEEECCCC-CEEEEEEEEE--ECCCCCCCCH----HH-HHHHHHHHHHHEEE--CCCCC-CE--EHHHCCEEEECCCCCC
T ss_conf 89980899-4588878764--0004322011----55-88888776631011--48751-10--0100300010468999
Q ss_pred CEEEEEEEEEEEECCEEEEEEEEEE--CCEEEEE
Q ss_conf 8899999999720777999999999--9999998
Q gi|254780770|r 111 DRLEYHVNKVRNRVDLWKFQCCAKV--ENTVVAE 142 (161)
Q Consensus 111 d~L~i~~~i~~~~~~~~~~~~~~~v--~~~~va~ 142 (161)
T Consensus 74 ~~L~A~A~ev~~~grtG~YDv~v~~G~~g~~vA~ 107 (115)
T TIGR02286 74 EVLVAEAVEVSRSGRTGVYDVEVRNGQEGELVAL 107 (115)
T ss_pred CEEEEEEEEEECCCCEEEEEEEEEECCCCEEEEE
T ss_conf 8789987884148911058889984699769998