HHsearch alignment for GI: 254780770 and conserved domain: cd00493

>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=100.00  E-value=1.4e-38  Score=251.88  Aligned_cols=128  Identities=48%  Similarity=0.730  Sum_probs=119.8

Q ss_pred             CCCCCEEEEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC--CCCEEEEEEEC
Q ss_conf             9997505478999984697499999826888313134799950225669999863463454432997--76302677523
Q gi|254780770|r   21 PHRYPFLLVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGF--DQYAPPYLMSI   98 (161)
Q Consensus        21 Phr~Pfl~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~--~~~~~~~l~~i   98 (161)
T Consensus         1 Phr~p~lliD~v~~~~~~~~~~~~k~v~~~~~ff~gHfp~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~   80 (131)
T cd00493           1 PHRYPMLLVDRVLEIDPGGRIVAEKNVTPNEPFFQGHFPGDPVMPGVLGIEAMAQAAAALAGLLGLGKGNPPRLGYLAGV   80 (131)
T ss_pred             CCCCCEEEEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
T ss_conf             98997688999999869998999999279977477205799966603799999999999974113344778835899971


Q ss_pred             CCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEE
Q ss_conf             64136002212888999999997207779999999999999998999999
Q gi|254780770|r   99 DKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAM  148 (161)
Q Consensus        99 ~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~  148 (161)
T Consensus        81 ~~~kf~~~v~Pgd~l~i~v~~~~~~~~~~~~~~~~~v~~~~v~~~~l~~~  130 (131)
T cd00493          81 RKVKFRGPVLPGDTLTLEVELLKVRRGLGKFDGRAYVDGKLVAEAELMAA  130 (131)
T ss_pred             EEEEEECEECCCCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEE
T ss_conf             38899340479989999999999889999999999999999999999970