HHsearch results for GI: 254780770 and protein with PDBid: 3e29_A

>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella bronchiseptica}
Probab=97.24  E-value=0.01  Score=35.37  Aligned_cols=126  Identities=15%  Similarity=0.133  Sum_probs=72.9

Q ss_pred             HHHHHHCCCCCCEE--EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCC-HHH--HHHHHHHHHHHHHHHCCCCC
Q ss_conf             98998479997505--47899998469749999982688831313479995022-566--99998634634544329977
Q gi|254780770|r   14 VELMRFLPHRYPFL--LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMP-GVL--ILEGMAQTAGAICAIHNGFD   88 (161)
Q Consensus        14 ~eI~~~lPhr~Pfl--~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmP-GvL--liE~maQ~~~~l~~~~~~~~   88 (161)
                      +-+.+++ .|.||.  +==++.++++| ++.....++.+  +...  |....+= |++  ++++.+-.+   +....+. 
T Consensus         7 e~~~~~~-~~~Pf~~~Lg~~v~~~~~~-~~~~~~~~~~~--~~~~--~~~G~vHGG~l~tl~D~~~g~a---~~~~~~~-   76 (144)
T 3e29_A            7 EMASRFV-NRSPFNRWLGMSVLEAGEQ-GIVLGIKWREE--LISS--PEIRSTHGGILATLVDAAGDYA---VALKTGH-   76 (144)
T ss_dssp             HHHHHHH-HTCHHHHHTTCEEEEESSS-CEEEEECCCGG--GBSC--TTTTCBCHHHHHHHHHHHHHHH---HHHHHSS-
T ss_pred             HHHHHHH-HCCCHHHHCCCEEEEEECC-EEEEEEECCHH--HCCC--CCCCEEEHHHHHHHHHHHHHHH---HHCCCCC-
T ss_conf             9999876-1687899809899999799-99999994899--9389--9886371546778887888999---8635798-


Q ss_pred             CCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC-CEEEEEEEEEEEEECCCC
Q ss_conf             630267752364136002212888999999997207779999999999-999998999999844520
Q gi|254780770|r   89 QYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE-NTVVAEAEICAMVMHEKK  154 (161)
Q Consensus        89 ~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~-~~~va~a~l~~~i~~~~~  154 (161)
                      .  .  ...-=++.|.+|+.+|+ |+.++++.+..++++.++++++.+ |+++|.|+-++++....+
T Consensus        77 ~--~--~Ti~l~i~flrp~~~g~-l~a~a~v~~~Gr~~~~~~~~i~~~~g~lvA~a~~tf~v~~P~~  138 (144)
T 3e29_A           77 P--V--PTMDMHVDYHRVATPGD-LRAEGQVIHFGKRFATAHARVLDMDGNLVASGRALYLIRAPLE  138 (144)
T ss_dssp             C--C--CEEEEEEEECSCCCSSC-EEEEEEEEEECSSEEEEEEEEEETTCCEEEEEEEEEECC----
T ss_pred             C--E--EEEEEEEEEECCCCCCE-EEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEECCCHH
T ss_conf             2--5--87889999976788966-9999999992887999999999799999999999999669205