HHsearch results for GI: 254780770 and protein with PDBid: 3e29_A
>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella bronchiseptica}
Probab=97.24 E-value=0.01 Score=35.37 Aligned_cols=126 Identities=15% Similarity=0.133 Sum_probs=72.9
Q ss_pred HHHHHHCCCCCCEE--EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCC-HHH--HHHHHHHHHHHHHHHCCCCC
Q ss_conf 98998479997505--47899998469749999982688831313479995022-566--99998634634544329977
Q gi|254780770|r 14 VELMRFLPHRYPFL--LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMP-GVL--ILEGMAQTAGAICAIHNGFD 88 (161)
Q Consensus 14 ~eI~~~lPhr~Pfl--~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmP-GvL--liE~maQ~~~~l~~~~~~~~ 88 (161)
+-+.+++ .|.||. +==++.++++| ++.....++.+ +... |....+= |++ ++++.+-.+ +....+.
T Consensus 7 e~~~~~~-~~~Pf~~~Lg~~v~~~~~~-~~~~~~~~~~~--~~~~--~~~G~vHGG~l~tl~D~~~g~a---~~~~~~~- 76 (144)
T 3e29_A 7 EMASRFV-NRSPFNRWLGMSVLEAGEQ-GIVLGIKWREE--LISS--PEIRSTHGGILATLVDAAGDYA---VALKTGH- 76 (144)
T ss_dssp HHHHHHH-HTCHHHHHTTCEEEEESSS-CEEEEECCCGG--GBSC--TTTTCBCHHHHHHHHHHHHHHH---HHHHHSS-
T ss_pred HHHHHHH-HCCCHHHHCCCEEEEEECC-EEEEEEECCHH--HCCC--CCCCEEEHHHHHHHHHHHHHHH---HHCCCCC-
T ss_conf 9999876-1687899809899999799-99999994899--9389--9886371546778887888999---8635798-
Q ss_pred CCEEEEEEECCCCEEEEEEEECCEEEEEEEEEEEECCEEEEEEEEEEC-CEEEEEEEEEEEEECCCC
Q ss_conf 630267752364136002212888999999997207779999999999-999998999999844520
Q gi|254780770|r 89 QYAPPYLMSIDKARFRKPVFPGDRLEYHVNKVRNRVDLWKFQCCAKVE-NTVVAEAEICAMVMHEKK 154 (161)
Q Consensus 89 ~~~~~~l~~i~~~kF~~~V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~-~~~va~a~l~~~i~~~~~ 154 (161)
. . ...-=++.|.+|+.+|+ |+.++++.+..++++.++++++.+ |+++|.|+-++++....+
T Consensus 77 ~--~--~Ti~l~i~flrp~~~g~-l~a~a~v~~~Gr~~~~~~~~i~~~~g~lvA~a~~tf~v~~P~~ 138 (144)
T 3e29_A 77 P--V--PTMDMHVDYHRVATPGD-LRAEGQVIHFGKRFATAHARVLDMDGNLVASGRALYLIRAPLE 138 (144)
T ss_dssp C--C--CEEEEEEEECSCCCSSC-EEEEEEEEEECSSEEEEEEEEEETTCCEEEEEEEEEECC----
T ss_pred C--E--EEEEEEEEEECCCCCCE-EEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEECCCHH
T ss_conf 2--5--87889999976788966-9999999992887999999999799999999999999669205