HHsearch results for GI: 254780770 and protein with PDBid: 3lw3_A
>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A
Probab=98.30 E-value=2.2e-05 Score=51.30 Aligned_cols=114 Identities=15% Similarity=0.133 Sum_probs=76.4
Q ss_pred EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf 47899998469749999982688831313479995022566999986346345443299776302677523641360022
Q gi|254780770|r 28 LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPV 107 (161)
Q Consensus 28 ~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V 107 (161)
+-=+++++++| +++.. ++..+.+...+ -++-|-++. +++-.+..++.. . .. . ...--+++|++|+
T Consensus 26 Lg~ei~~~~~G-~~~~~--l~v~~~~~n~~----G~vHGG~i~-tl~D~a~~~a~~--~--~~--~-vT~~~~i~fl~p~ 90 (145)
T 3lw3_A 26 LCAELISFGSG-KATVC--LTPKEFMLCED----DVVHAGFIV-GAASFAALCALN--K--KN--S-LISSMKVNLLAPI 90 (145)
T ss_dssp GSCEEEEEETT-EEEEE--ECCCGGGEEET----TEECHHHHH-HHHHHHHHHHHC--C--TT--E-EEEEEEEEECSCC
T ss_pred HCEEEEEEECC-EEEEE--ECCCHHHHCCC----CCCCHHHEE-HHHHHHHHHHHC--C--CC--E-EEEEEEEEEECCC
T ss_conf 29199999699-89999--73998992978----918410251-556542166537--7--85--6-9711325882124
Q ss_pred EECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCCCC
Q ss_conf 1288899999999720777999999999999999899999984452002
Q gi|254780770|r 108 FPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKKEK 156 (161)
Q Consensus 108 ~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~e~ 156 (161)
.+||.|+.++++.+..+....++++++++++.+++|++++++.+++.=|
T Consensus 91 ~~G~~l~a~A~vv~~g~r~~~v~vev~~~d~~V~~gt~~~~v~d~~~~k 139 (145)
T 3lw3_A 91 EIKQEIYFNATITHTSSKKSTIRVEGEFMEIKVFEGDFEILVFEKRPFK 139 (145)
T ss_dssp CTTCCEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEEC------
T ss_pred CCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEEECCHHHH
T ss_conf 8999999999999959949999999999999999999999998565541