HHSEARCH alignment of GI: 254780770 and SCOP domain: d1ixla_

Alignment
>d1ixla_ d.38.1.5 (A:) Hypothetical protein PH1136 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.60  E-value=2.4e-06  Score=55.64  Aligned_cols=112  Identities=20%  Similarity=0.195  Sum_probs=76.1

Q ss_pred             EEEEEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEE
Q ss_conf             4789999846974999998268883131347999502-256699998634634544329977630267752364136002
Q gi|254780770|r   28 LVDKVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVM-PGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKP  106 (161)
Q Consensus        28 ~ID~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~Pvm-PGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~  106 (161)
                      ++=+++++++| ++.....++.+. .++.    .-++ -|++ . +++-.++..+..  .  ..   ....--+++|++|
T Consensus        16 l~~~~v~~~~g-~a~~~l~~~~~~-~~n~----~G~vHGG~l-~-~l~D~a~~~a~~--~--~~---~vT~~l~i~fl~p   80 (130)
T d1ixla_          16 LVGKPILIKEG-YAEVELETIDEM-KVDE----KGLVHGGFT-F-GLADYAAMLAVN--E--PT---VVLGKAEVRFTKP   80 (130)
T ss_dssp             TTCEEEEEETT-EEEEEEECCGGG-BSST----TCBBCHHHH-H-HHHHHHHHHHHC--C--TT---EEEEEEEEEECSC
T ss_pred             CCEEEEEEECC-EEEEEEEECHHH-CCCC----CCCCCCHHH-H-HHHHHHCCCCCC--C--CE---EEEEEEEEEEEEC
T ss_conf             53499999799-999999987899-2189----981823587-8-877632024234--5--50---8999988999303


Q ss_pred             EEECCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEEECCCC
Q ss_conf             212888999999997207779999999999999998999999844520
Q gi|254780770|r  107 VFPGDRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMVMHEKK  154 (161)
Q Consensus       107 V~PGd~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i~~~~~  154 (161)
                      +.+||++++++++.+..+..+.++++++++++++|+|++++++.+++.
T Consensus        81 v~~G~~l~~~a~vi~~g~~~~~v~~~i~~~~~~Va~g~~~~~~~~k~~  128 (130)
T d1ixla_          81 VKVGDKLVAKAKIIEDLGKKKIVEVKVYREEEVVLEGKFYCYVLEKHV  128 (130)
T ss_dssp             CBTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEECSSCT
T ss_pred             CCCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEEECHHH
T ss_conf             355727999999999489699999999999999999999999977300


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein PH1136
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]