HHSEARCH alignment of GI: 254780770 and SCOP domain: d1wlua1

Alignment
>d1wlua1 d.38.1.5 (A:2-117) Phenylacetic acid degradation protein PaaI {Thermus thermophilus [TaxId: 274]}
Probab=97.67  E-value=0.0017  Score=38.53  Aligned_cols=105  Identities=19%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             EEEEEECCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             99998469749999982688831313479995022566999986346345443299776302677523641360022128
Q gi|254780770|r   31 KVVNIQRDESAIGIKNVTFNEPHFMGHFPGRPVMPGVLILEGMAQTAGAICAIHNGFDQYAPPYLMSIDKARFRKPVFPG  110 (161)
Q Consensus        31 ~i~~~~~g~~~~g~k~v~~~e~ff~gHFp~~PvmPGvLliE~maQ~~~~l~~~~~~~~~~~~~~l~~i~~~kF~~~V~PG  110 (161)
                      ++.++++|. ++....++  +++..   |..-+--|++ . +++-+++..+.....    . . ...--+++|.+|+.+|
T Consensus        11 ~~~~~~~g~-~~~~~~~~--~~~~n---~~G~~hGG~i-~-tl~D~~~~~a~~~~~----~-~-vT~~l~i~fl~p~~~g   76 (116)
T d1wlua1          11 KVLHLAPGE-AVVAGEVR--ADHLN---LHGTAHGGFL-Y-ALADSAFALASNTRG----P-A-VALSCRMDYFRPLGAG   76 (116)
T ss_dssp             EEEEEETTE-EEEEEECC--GGGBC---TTSSBCHHHH-H-HHHHHHHHHHHHTTS----C-E-EEEEEEEEECSCCCTT
T ss_pred             EEEEEECCE-EEEEEEEC--HHHCC---CCCCCCCEEE-E-EEEHHHHHHHHHCCC----C-E-EEEEEEEEECCCCCCC
T ss_conf             999996999-99999909--99969---9997927658-8-896111112553167----2-6-9999999872467999


Q ss_pred             CEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEEEEE
Q ss_conf             889999999972077799999999999999989999998
Q gi|254780770|r  111 DRLEYHVNKVRNRVDLWKFQCCAKVENTVVAEAEICAMV  149 (161)
Q Consensus       111 d~L~i~~~i~~~~~~~~~~~~~~~v~~~~va~a~l~~~i  149 (161)
                      +.+++++++.+..+....++++++.+|+++|++.-+++-
T Consensus        77 ~~l~~~a~v~~~g~~~~~~~~~i~~~~~lvA~a~~t~~r  115 (116)
T d1wlua1          77 ARVEARAVEVNLSRRTATYRVEVVSEGKLVALFTGTVFR  115 (116)
T ss_dssp             CEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             CEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEE
T ss_conf             899999999995886999999999999999999999997


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Phenylacetic acid degradation protein PaaI
species: Thermus thermophilus [TaxId: 274]