HHsearch alignment for GI: 254780771 and conserved domain: PRK11930
>PRK11930 putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Provisional.
Probab=96.32 E-value=0.0084 Score=34.04 Aligned_cols=94 Identities=12% Similarity=0.166 Sum_probs=66.5
Q ss_pred CCCHHHHHHHHCCEEECCC-CCCEEECCCCC-HHHCC--CCCEEEEC------CHHHHHHHHHCCCEEEEECHHHHHCCC
Q ss_conf 8039999998466995577-66338715679-88889--98699961------867677775458569998877610144
Q gi|254780771|r 12 GIALMKLAQSIGASLLDEN-FGERMIYSLSP-IARAS--TGDISYII------SRKFLNNIEKCKASAIICSQDIVPFIP 81 (347)
Q Consensus 12 ~~sl~eIa~~l~~~l~g~~-~~d~~I~~I~~-l~~A~--~~~IsFi~------~~kyl~~l~~s~A~aiI~~~d~~~~~~ 81 (347)
T Consensus 2 ~~~~~~i~~~~g~~~~g~~~~~~~~I~~i~tDSR~l~~~~~~LFvAL~Ger~DGH~fi~~A~~~GA~~~vv~~~~~~~~~ 81 (824)
T PRK11930 2 SISIEELIRVLGANRVGGKTEFDAFIDQLLIDSRSLSFPENTLFFALKGKRNDGHRYIQELYEKGVRNFVVSEIPKDLME 81 (824)
T ss_pred CEEHHHHHHHHCCEEECCCCCCCCEECEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC
T ss_conf 04099999863978857888888323639935887657998689995678888799999999889909999456655455
Q ss_pred -CCCCCEECCCCCHHHHHHCCCCCC
Q ss_conf -455310012320112210121112
Q gi|254780771|r 82 -KNIPCLLSDKPEVSFAIAGSILYP 105 (347)
Q Consensus 82 -~~~~~Iiv~nP~~afA~i~~~l~~ 105 (347)
T Consensus 82 ~~~~~~i~V~Dtl~ALq~LA~~~R~ 106 (824)
T PRK11930 82 KKPANFLIVKNPLKALQKLAAYYRK 106 (824)
T ss_pred CCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 7887789989899999999999997