HHsearch alignment for GI: 254780771 and conserved domain: PRK13627

>PRK13627 carnitine operon protein CaiE; Provisional.
Probab=99.72  E-value=3.7e-18  Score=117.26  Aligned_cols=97  Identities=11%  Similarity=0.204  Sum_probs=74.2

Q ss_pred             EEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             42010000023213445433556665311044432000024444544443322222211111222111234444650357
Q gi|254780771|r  184 IGNSVILHSGVRIGNDGFGYARGVSDIHKIVHIGRVIIQDKVEIGANSAIDRGTIDDTIIGENTKIDNQVQIGHNVHIGC  263 (347)
Q Consensus       184 IG~~~~I~~~~vIG~~GFgf~~~~~~~~~~~~~G~v~Ig~~v~IG~n~tIdrg~~~~t~Ig~~~~id~~v~i~hn~~iG~  263 (347)
T Consensus        52 IG~~tNIQD~~viH~~~-------~--------~~~~IG~~vtIGH~ail-----------------------hgc~Igd   93 (196)
T PRK13627         52 VQAGANLQDGCIMHGYC-------D--------TDTIVGENGHIGHGAIL-----------------------HGCVIGR   93 (196)
T ss_pred             ECCCCEECCCCEEECCC-------C--------CCCEECCCEEECCCEEE-----------------------EEEEEEC
T ss_conf             89986767983781489-------9--------98588898058787299-----------------------6349948


Q ss_pred             CEEEEEEEEEECCCEECCCCEEEECCEEECCEEECCCCEECCC-CEEEEEECCCCE
Q ss_conf             7188655565036365697297306878378598888898625-326000079878
Q gi|254780771|r  264 GCIIVSQVGIAGSTYIGDNVLIGGQCGIAGYLKIGDNVQIASK-SGVLKDIPAGQQ  318 (347)
Q Consensus       264 ~~~~~~~~~~~g~~~ig~~~~ig~~~~i~~~v~ig~~~~i~a~-s~v~~~v~~~~~  318 (347)
T Consensus        94 ~~lIGmgavVldga~Ig~~~iI~AgslV~~g~~ip~~~L~~G~PAk~vR~lt~~ei  149 (196)
T PRK13627         94 DALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEKRQLLMGTPARAVRSVSDQEL  149 (196)
T ss_pred             CCEECCCCEEECCCEECCCCEECCCCEECCCCCCCCCCEEEECCEEEEECCCHHHH
T ss_conf             97884697992888999998997686457994938981998778168114999999