HHsearch alignment for GI: 254780771 and conserved domain: TIGR01853

>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro: IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (2.3.1 from EC) catalyses an early step in lipid A biosynthesis : UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + (R)-3-hydroxytetradecanoyl- [acyl carrier protein] = UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine + [acyl carrier protein] Members of this family also contain a hexapeptide repeat (IPR001451 from INTERPRO). This entry represents the non-repeating region of LPXD proteins.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0009245 lipid A biosynthetic process.
Probab=100.00  E-value=0  Score=713.84  Aligned_cols=331  Identities=45%  Similarity=0.748  Sum_probs=314.9

Q ss_pred             HHHHHHCCEEECCCCCCEEECCCCCHHHCCCCCEEEECCHHHHHHHHHCCCEEEEECHHHHHC-CCCCCCCEECCCCCHH
Q ss_conf             999984669955776633871567988889986999618676777754585699988776101-4445531001232011
Q gi|254780771|r   17 KLAQSIGASLLDENFGERMIYSLSPIARASTGDISYIISRKFLNNIEKCKASAIICSQDIVPF-IPKNIPCLLSDKPEVS   95 (347)
Q Consensus        17 eIa~~l~~~l~g~~~~d~~I~~I~~l~~A~~~~IsFi~~~kyl~~l~~s~A~aiI~~~d~~~~-~~~~~~~Iiv~nP~~a   95 (347)
T Consensus         1 ela~~~~~El~g~a~g~~~i~~v~~l~~A~~~~itF~~n~K~~~~l~~~~AgAv~~~~~~~~~~~~~~~~~L~v~~P~l~   80 (336)
T TIGR01853         1 ELAERLGAELKGDAEGDIKISGVAPLEKAKAEHITFLANPKYLKELKSSKAGAVIVSADDQSKLVPKKCAALVVKDPYLA   80 (336)
T ss_pred             CCHHHCCCEEECCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCEEEECCCHHH
T ss_conf             90442085023566676688530763358802266533804787651577407997156617855232505781781799


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCE
Q ss_conf             22101211122211235576543331001565323344200001100112320331122100000002332100233220
Q gi|254780771|r   96 FAIAGSILYPQAMHMEASSFEGGISPQAFLGEDVKIEDGVVIAPMAVVYPGVEIGRKTYVGPGSVIGAGVRIGRNCSIGA  175 (347)
Q Consensus        96 fA~i~~~l~~~~~~~~~~~~~~~I~~~a~I~~~a~I~~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~  175 (347)
T Consensus        81 fA~~~~~F~~~~~~~lvaR~~~gi~p~a~~~~~a~~~~~v~I~pnvvIG~~v~IG~~~~I~pg~~iG~~v~IG~~~~i~~  160 (336)
T TIGR01853        81 FAKVAELFDPPPKRLLVARMEAGIHPTAVVEPSAKIGEGVTIGPNVVIGAGVEIGENVIIGPGVVIGDDVVIGDGSVIYP  160 (336)
T ss_pred             HHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCEECCCCEECCCCEECCCCEECCCCEEEC
T ss_conf             99999860887650121101035676873056531078436875417888868778636357768768868799677806


Q ss_pred             EEEEEE-EEEEECCCCCEEEECCCCCCCCCCCC-CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             233100-24420100000232134454335566-6531104443200002444454444332222221111122211123
Q gi|254780771|r  176 GSSIYS-SLIGNSVILHSGVRIGNDGFGYARGV-SDIHKIVHIGRVIIQDKVEIGANSAIDRGTIDDTIIGENTKIDNQV  253 (347)
Q Consensus       176 ~~~I~~-~iIG~~~~I~~~~vIG~~GFgf~~~~-~~~~~~~~~G~v~Ig~~v~IG~n~tIdrg~~~~t~Ig~~~~id~~v  253 (347)
T Consensus       161 ~v~i~~~~~lG~nV~I~~GaVIG~DGFGya~~~~g~~~KI~q~G~ViI~D~VEIGANTtIDRg~~~dT~i~~gtKIDNLV  240 (336)
T TIGR01853       161 NVVIYERVQLGKNVIIHAGAVIGSDGFGYAHTANGGHVKIPQIGRVIIEDDVEIGANTTIDRGAFDDTVIGEGTKIDNLV  240 (336)
T ss_pred             CCEEEECCEECCEEEECCCCEECCCCCCEEECCCCCEEEEEEECEEEEECEEEECCCCHHHCCCCCCCEEECCCEECCEE
T ss_conf             70897241564715876887886787320357889715441302489602338746870211021471872384662315


Q ss_pred             CCCCCCCCCCCEEEEEEEEEECCCEECCCCEEEECCEEECCEEECCCCEECCCCEEEEEECCCCEEEE--ECCHHHHHHH
Q ss_conf             44446503577188655565036365697297306878378598888898625326000079878998--2417588897
Q gi|254780771|r  254 QIGHNVHIGCGCIIVSQVGIAGSTYIGDNVLIGGQCGIAGYLKIGDNVQIASKSGVLKDIPAGQQYGG--MPARPIGEYL  331 (347)
Q Consensus       254 ~i~hn~~iG~~~~~~~~~~~~g~~~ig~~~~ig~~~~i~~~v~ig~~~~i~a~s~v~~~v~~~~~~~G--~pa~~~~~~~  331 (347)
T Consensus       241 QIAHNc~IG~n~~ivaqvGiaGSt~iG~~V~~GGqvGv~GHl~IgD~v~i~A~sgV~~~~~~~~~ygggi~Pa~~~~~w~  320 (336)
T TIGR01853       241 QIAHNCRIGENCIIVAQVGIAGSTKIGRNVILGGQVGVAGHLEIGDNVTIGAKSGVTKSVPPNGRYGGGIIPAMPQKEWL  320 (336)
T ss_pred             EEEEEEEECCCCEEEEEEECCEEEEECCEEEECCEEEEECEEEECCCCEEEEECCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf             74133462664278964201134675580696260265110894383488451220677798860100111412024789


Q ss_pred             HHHHHHCCHHHHHHCC
Q ss_conf             8678622826764179
Q gi|254780771|r  332 RHMVMLSKPSKYKIKR  347 (347)
Q Consensus       332 ~~~~~~~~l~~~~~~~  347 (347)
T Consensus       321 k~~a~~~~l~~~~~r~  336 (336)
T TIGR01853       321 KIAAKLKRLPELRKRV  336 (336)
T ss_pred             HHHHHHHHCHHHHCCC
T ss_conf             9999987142553179