HHsearch alignment for GI: 254780771 and conserved domain: TIGR02092
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit; InterPro: IPR011832 This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, IPR011831 from INTERPRO) in a subset of bacteria that use GlgC for glycogen biosynthesis.; GO: 0005978 glycogen biosynthetic process.
Probab=97.95 E-value=5.7e-06 Score=51.19 Aligned_cols=78 Identities=21% Similarity=0.312 Sum_probs=55.2
Q ss_pred CCEEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 32033112210000000233210023322023310024420100000232134454335566653110444320000244
Q gi|254780771|r 146 GVEIGRKTYVGPGSVIGAGVRIGRNCSIGAGSSIYSSLIGNSVILHSGVRIGNDGFGYARGVSDIHKIVHIGRVIIQDKV 225 (347)
Q Consensus 146 ~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~iIG~~~~I~~~~vIG~~GFgf~~~~~~~~~~~~~G~v~Ig~~v 225 (347)
T Consensus 303 nSl~anGc~IEG~V---~NSil~R~V~v~kd~~~kn~iimq~~~Ig~ga~L--------------------~~vI~DK~~ 359 (383)
T TIGR02092 303 NSLVANGCIIEGKV---ENSILSRGVYVGKDALIKNSIIMQRTVIGEGAHL--------------------ENVIIDKDV 359 (383)
T ss_pred EEEEECCCEECCEE---EEEEEECCEEECCCCEEEEEEECCCCEECCCCEE--------------------EEEEECCCC
T ss_conf 66676263561488---5579855418727867875477588777878656--------------------158865762
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 4454444332222-221111122
Q gi|254780771|r 226 EIGANSAIDRGTI-DDTIIGENT 247 (347)
Q Consensus 226 ~IG~n~tIdrg~~-~~t~Ig~~~ 247 (347)
T Consensus 360 ~I~~n~~~~-G~~e~PlVi~Kg~ 381 (383)
T TIGR02092 360 VIEPNEKIA-GTSEQPLVISKGK 381 (383)
T ss_pred EECCCEEEE-ECCCCCEEECCCC
T ss_conf 878870685-2478862644876