HHsearch alignment for GI: 254780771 and conserved domain: cd00208
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.
Probab=99.24 E-value=2e-12 Score=86.23 Aligned_cols=17 Identities=59% Similarity=0.804 Sum_probs=12.1
Q ss_pred CCEECCCCCCCCCCCCC
Q ss_conf 20000244445444433
Q gi|254780771|r 218 RVIIQDKVEIGANSAID 234 (347)
Q Consensus 218 ~v~Ig~~v~IG~n~tId 234 (347)
T Consensus 44 ~~~Ig~~v~Ig~~a~I~ 60 (78)
T cd00208 44 PTIIGDNVEIGANAVIH 60 (78)
T ss_pred CCEECCCEEECCCCEEE
T ss_conf 98999996998689897