HHsearch alignment for GI: 254780771 and conserved domain: cd03360
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.
Probab=99.47 E-value=1.5e-14 Score=97.69 Aligned_cols=102 Identities=28% Similarity=0.380 Sum_probs=69.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEECCC
Q ss_conf 23557654333100156532334420000110011232033112210000000233210023322023310024420100
Q gi|254780771|r 110 MEASSFEGGISPQAFLGEDVKIEDGVVIAPMAVVYPGVEIGRKTYVGPGSVIGAGVRIGRNCSIGAGSSIYSSLIGNSVI 189 (347)
Q Consensus 110 ~~~~~~~~~I~~~a~I~~~a~I~~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~iIG~~~~ 189 (347)
T Consensus 84 ~niIhp~a~i~~~~~ig~G~~I~~~~~i~~~~~IG~~~~i~~~~~i~Hd~~ig~~~~i~~~~~i~g~v~-----Ig~~~~ 158 (197)
T cd03360 84 ATLIHPSAVVSPSAVIGEGCVIMAGAVINPDARIGDNVIINTGAVIGHDCVIGDFVHIAPGVVLSGGVT-----IGEGAF 158 (197)
T ss_pred EEEECCCCEECCCCEECCCCEEECCCEECCCCCCCCEEEECCCHHCCCCCCCCCCCEECCCEEECCCEE-----EEEECC
T ss_conf 899999959877747999429931759865653043689877001053150131010667236778308-----912162
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 0002321344543355666531104443200002444454444332
Q gi|254780771|r 190 LHSGVRIGNDGFGYARGVSDIHKIVHIGRVIIQDKVEIGANSAIDR 235 (347)
Q Consensus 190 I~~~~vIG~~GFgf~~~~~~~~~~~~~G~v~Ig~~v~IG~n~tIdr 235 (347)
T Consensus 159 iG~~~~i~-------------------~~i~Ig~~~~igags~v~~ 185 (197)
T cd03360 159 IGAGATII-------------------QGVTIGAGAIIGAGAVVTK 185 (197)
T ss_pred CCCCCEEC-------------------CCCEECCCCEECCCCEEEE
T ss_conf 98998987-------------------9989999999997998912