HHsearch alignment for GI: 254780771 and conserved domain: cd05636
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.84 E-value=1.4e-21 Score=135.92 Aligned_cols=82 Identities=22% Similarity=0.252 Sum_probs=43.0
Q ss_pred CCCCCCCCCCCCCCCCCCEEHHHCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCC
Q ss_conf 33100156532334420000110011232033112210000000233210023322023310024420100000232134
Q gi|254780771|r 119 ISPQAFLGEDVKIEDGVVIAPMAVVYPGVEIGRKTYVGPGSVIGAGVRIGRNCSIGAGSSIYSSLIGNSVILHSGVRIGN 198 (347)
Q Consensus 119 I~~~a~I~~~a~I~~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~iIG~~~~I~~~~vIG~ 198 (347)
T Consensus 26 I~~~a~I~~~v~IG~~~~Ig~~~~I~~~~~IG~~~~IG~~~~I~-~~vi~~~~~i~~~~~ig~siIG~~v~IGagtvi~n 104 (163)
T cd05636 26 VRSGAYIEGPVIIGKGCEIGPNAYIRGYTVLGDGCVVGNSVEVK-NSIIMDGTKVPHLNYVGDSVLGENVNLGAGTITAN 104 (163)
T ss_pred ECCCCEEECCEEECCCCEEEECCCCCCCEEECCEEEECCCEEEC-CCCCCCCCCCCCCCEECCCEECCCCEECCCEEEEC
T ss_conf 99999997975998998993641226985861301205512421-24014784327756877729929969889837817
Q ss_pred CCC
Q ss_conf 454
Q gi|254780771|r 199 DGF 201 (347)
Q Consensus 199 ~GF 201 (347)
T Consensus 105 ~~~ 107 (163)
T cd05636 105 LRF 107 (163)
T ss_pred CCC
T ss_conf 767