HHsearch alignment for GI: 254780772 and conserved domain: COG0729
>COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=443.14 Aligned_cols=506 Identities=18% Similarity=0.267 Sum_probs=375.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC--CCCCCCCCCHHHHHHH---HHCCCCCEE
Q ss_conf 45788888875423221001231012455554101220222210000012--3334445576777753---211699621
Q gi|254780772|r 240 DEEAIRAFYHDRGYAAVKVSSQVLFDKQKSGYVLIFQIDEGEIYTVGNIS--IQSTLQEIQKKTLLSL---IRIRSGNLY 314 (781)
Q Consensus 240 D~~~l~~~Y~~~GY~d~~V~~~~~~~~~~~~~~i~~~I~EG~~y~i~~i~--i~g~~~~~~~~~l~~~---~~~k~G~~~ 314 (781)
T Consensus 77 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~pg~~~~i~~~~~~~~G~-a-~~d~~~~~~~~~~~~~~G~~~ 148 (594)
T COG0729 77 DGLRALGYLQPKGRFGGKV------SVTEKRGKLIAKVTPGEPTPIAVVIVVLPGP-A-FTDGDYRLLGDAAGPKEGEDL 148 (594)
T ss_pred HHHHHHCEECCEEEECCCC------EEECCCCCEEEECCCCCCCCCCEEEEECCCC-C-CCCHHHHHHHHHHCCCCCCCC
T ss_conf 6776420004503541431------0003455213323899986653256622462-0-037346554343121358735
Q ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCC
Q ss_conf 12100000000000023445642011-23322343440466554123332201100333343200332100100100000
Q gi|254780772|r 315 NPQEIKESSEKISKYFFSGERPFVRV-KTRINRDFAKRIVDIEYLIDQGSPLYVKRIEIEGNDQSYDSVIRRELELSEGD 393 (781)
Q Consensus 315 ~~~~~~~~~~~i~~~y~~~GY~fa~v-~~~~~~d~~~~~vdi~~~I~eg~~~~i~~I~I~GN~~T~d~VIrrel~~~~Gd 393 (781)
T Consensus 149 ~~~~~~n~k~~i~~~~~~~gy~~a~~~~~r~~v~~~~~~a~~~~~~dsG~~y~~g~v~~~g~~r~~~~~~~~~~~~~~G~ 228 (594)
T COG0729 149 NQGTYENAKSSIVRALLRKGYFLARFTKSRLVVDPATHTADVDLNYDSGRRYRFGPVTVEGSQRIDEEYLQNLVPFKYGL 228 (594)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCEEECCCEECCHHHHHHCCCCCCCC
T ss_conf 65211114678999998728300025403011162315688998633541697676797166035877876303666788
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 0012344456667765101234453325443565-431023322112211111111122332110000011123332344
Q gi|254780772|r 394 PINYSMIERAKRRIMATGYFSEVNISQLPANDVS-DYVILRVSVKQLSAGSVGIATNYEVDKGMGVEGHIDDNNFFGQGY 472 (781)
Q Consensus 394 ~~~~~~i~~s~~~L~~lg~F~~V~i~~~~~~~~~-~~vdl~i~v~E~~tg~~~~g~gys~~~g~~~~~~~~~~Nl~G~G~ 472 (781)
T Consensus 229 ~Y~~~~l~~~~~rl~~~~~F~sv~v~~~~~~~~~~~~~pv~v~~~~rk~~~~~lG~gyst~~G~~~~~~w~~~~~~~~~~ 308 (594)
T COG0729 229 PYDPEDLAELNQRLRQTGYFSSVVVQPADKQAGPDGLLPVKVSVSERKENTFELGVGYSTDVGAGLEAGWEKRNLFGRGH 308 (594)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCE
T ss_conf 67877999999987615850348981275555767603539885246553377646884263565168863422357650
Q ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC--CEEEEEEECCCCEEEEECCCEEEEE
Q ss_conf 22003787411221111345411235777-54310011113333334323332--0245542025430235404125776
Q gi|254780772|r 473 RARLAAGFGRHAVQNYTFSVEDPYFLGSP-ISAGFDLQKTHLEDGSLDINDES--AAVRMIVPITESISTSFKYDLRFLQ 549 (781)
Q Consensus 473 ~l~l~~~~~~~~~~~~~~s~~~P~~~~~~-~s~~~~~~~~~~~~~~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (781)
T Consensus 309 ~l~~~~~is~~~-~~~~~~y~~p~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~ 387 (594)
T COG0729 309 SLRIESEISAPL-QTLEATYKAPLLFNPLGQYNPVSAGFDRLDLYDTESDAYTESLSASRGWDASLGWQRSLALRFSYDN 387 (594)
T ss_pred EEEEEEEECCCH-HCCCEEEEEECCCCCCCCEECCCCCCCCHHHHCCCCCCCCCEEEEEEHHCCCCCCEEEEEEEEECCC
T ss_conf 575412660001-0175379820135876512033223442011014432234313111000003672037888887255
Q ss_pred EECCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCC--CCCCCCEEEEEEEEEEEEEEEC
Q ss_conf 40146754420111221015850246788432155420110024651565420245--6555420366663004799935
Q gi|254780772|r 550 YGAISEKEKIPSIYTTLIEHGKFSSHSISQSIIYNTLDNPIVPRKGMLISSSYDYA--GFGGDSQYHRIGSRASYFYLLS 627 (781)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~dtrD~~~~Pt~G~~~~~~~~~a--~~g~d~~f~k~~~~~~~y~~l~ 627 (781)
T Consensus 388 -~~~~----------~~~~~~~~~~~g~~~~~~~~~-dd~~~Pt~G~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~ 455 (594)
T COG0729 388 -FRQG----------DISGKTSLLTPGVEFSYTRDT-DDGLFPTWGDRLDLTIGPSYEALGSDVDFRLVQARSGYLRTGG 455 (594)
T ss_pred -CCCC----------CCCCCCEEEECCEEEEEEECC-CCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCEEEECCC
T ss_conf -4346----------545783577423478999716-8877887650455552001011457257765431350551376
Q ss_pred CCEEEEEEEEEEEEEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCE
Q ss_conf 88099999999789851699741230127507897140212686155037997222147899999999614565654537
Q gi|254780772|r 628 DDSDIVGSLRFGYGCVIPSNKNLQLFDQFSVSSNYYLRGFAYKGIGPRVDKKYAIGGKIYSSASAAVSFPMPLVPERAGL 707 (781)
Q Consensus 628 ~~~~l~~~~~~g~~~~~~~~~~lp~~erF~lGG~~svRGy~~~~iGP~~~~~~~~GG~~~~~~s~E~r~pl~~~~~~~~l 707 (781)
T Consensus 456 ~~~~~~~R~~~G~il~-~~~~~vPps~rFfaGG~~svRGY~y~sI~p~~~~g~~~Gg~~l~~~s~Ey~~~~t-----~~~ 529 (594)
T COG0729 456 ADHRLAGRGELGAILT-GDLDDVPPSLRFFAGGDRSVRGYGYQSIGPQDANGDLLGGRSLVTGSLEYQYLVT-----DPW 529 (594)
T ss_pred CCEEEEEECCCCEEEE-CCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECC-----CCE
T ss_conf 4248887223213850-7500189510464079741515203223676778973264689996279999634-----866
Q ss_pred EEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEEEECC
Q ss_conf 99999976774156666775444567664247999999975570015899887226778760258999641059
Q gi|254780772|r 708 RGAFFVDSATLYANHVALGADKLEGNDSFWRVSTGVEIMWNSPLGMMGVYYGIPLRHREGDKIQQFGFRIGNRM 781 (781)
Q Consensus 708 ~~~~F~D~G~v~~~~~~~~~~~~~~~~~~~r~s~G~Glr~~tP~Gpirld~a~pl~~~~~D~~~~f~FsiG~~f 781 (781)
T Consensus 530 ~~a~FvD~G~a~n~~~~~~--------~d~k~G~Gigvr~~SPvGPIr~DiA~pl~~~~-~~~~~~Yi~iG~~f 594 (594)
T COG0729 530 GLAVFVDAGSAGNNFTRLF--------SDLKKGAGIGVRWDSPVGPIRFDIAVPLEDKD-DKKFQFYIGIGQEF 594 (594)
T ss_pred EEEEEEECCCCCCCCCHHH--------HHHHCCCEEEEEECCCCCCEEEEEECCCCCCC-CCCEEEEEEECCCC
T ss_conf 8999987265335886455--------44202523667654886875777432555567-88716999815669