HHsearch alignment for GI: 254780772 and conserved domain: COG0729
>COG0729 Outer membrane protein [Cell envelope biogenesis, outer membrane].
Probab=99.33 E-value=2.8e-11 Score=91.13 Aligned_cols=212 Identities=12% Similarity=0.191 Sum_probs=149.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE-CCCCCEEEEEEEECCCCEEEE--EEEEECCCCCCHHHHHHHHH-CCC
Q ss_conf 99999999999999999729700179987643-389842588986036632467--78750443110122221110-012
Q gi|254780772|r 145 DEDTVNADVHNIKQAYASIGYLNVMVKVQHHS-ISPTTLNITYVIEEGVKAKIN--SIRFVGNKNYSHARLERVIS-IRT 220 (781)
Q Consensus 145 ~~~~~~~~~~~i~~~y~~~Gy~~a~V~~~~~~-~~~~~v~i~~~I~EG~~~~I~--~I~f~Gn~~f~~~~L~~~~~-~k~ 220 (781)
T Consensus 64 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~pg~~~~i~~~~~~~~G-~a~~d~~~~~~~~~~~~ 142 (594)
T COG0729 64 DSRFRGLLDKARRDGLRALGYLQPKGRFGGKVSVTEKRGKLIAKVTPGEPTPIAVVIVVLPG-PAFTDGDYRLLGDAAGP 142 (594)
T ss_pred CCCHHHHHHHCCCHHHHHHCEECCEEEECCCCEEECCCCCEEEECCCCCCCCCCEEEEECCC-CCCCCHHHHHHHHHHCC
T ss_conf 31034565641016776420004503541431000345521332389998665325662246-20037346554343121
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 21124456664310233334578888887542322100-12310124555541012202222100000123334445576
Q gi|254780772|r 221 SGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKV-SSQVLFDKQKSGYVLIFQIDEGEIYTVGNISIQSTLQEIQK 299 (781)
Q Consensus 221 ~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V-~~~~~~~~~~~~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~ 299 (781)
T Consensus 143 ~------~G~~~~~~~~~n~k~~i~~~~~~~gy~~a~~~~~r~~v~~~~~~a~~~~~~dsG~~y~~g~v~~~g~-~r~~~ 215 (594)
T COG0729 143 K------EGEDLNQGTYENAKSSIVRALLRKGYFLARFTKSRLVVDPATHTADVDLNYDSGRRYRFGPVTVEGS-QRIDE 215 (594)
T ss_pred C------CCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCEEECCC-EECCH
T ss_conf 3------5873565211114678999998728300025403011162315688998633541697676797166-03587
Q ss_pred HHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEEEEECCCCCCCEEE
Q ss_conf 777753211699621121000000000000234456420-112332234344046655412333220110
Q gi|254780772|r 300 KTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPFV-RVKTRINRDFAKRIVDIEYLIDQGSPLYVK 368 (781)
Q Consensus 300 ~~l~~~~~~k~G~~~~~~~~~~~~~~i~~~y~~~GY~fa-~v~~~~~~d~~~~~vdi~~~I~eg~~~~i~ 368 (781)
T Consensus 216 ~~~~~~~~~~~G~~Y~~~~l~~~~~r----l~~~~~F~sv~v~~~~~~~~~~~~~pv~v~~~~rk~~~~~ 281 (594)
T COG0729 216 EYLQNLVPFKYGLPYDPEDLAELNQR----LRQTGYFSSVVVQPADKQAGPDGLLPVKVSVSERKENTFE 281 (594)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHH----HHHCCCEEEEEEECCCCCCCCCCEECEEEEECCCCCCEEE
T ss_conf 78763036667886787799999998----7615850348981275555767603539885246553377