HHsearch alignment for GI: 254780772 and conserved domain: COG2831
>COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion].
Probab=100.00 E-value=1.6e-38 Score=269.36 Aligned_cols=463 Identities=16% Similarity=0.203 Sum_probs=325.0
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 02222100000123334445576777753211699621121000000000000234456420112332234344046655
Q gi|254780772|r 277 IDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPFVRVKTRINRDFAKRIVDIE 356 (781)
Q Consensus 277 I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k~G~~~~~~~~~~~~~~i~~~y~~~GY~fa~v~~~~~~d~~~~~vdi~ 356 (781)
T Consensus 67 ~~E~~~f~I~~i~l~g~-~~~~~~~l~~~~~~~~g~~l~~~~l~~l~~~lt~~y~~~GYvtsra~lp-~Q~i~~G~l--~ 142 (554)
T COG2831 67 PDETPCFPINRIELEGN-TLLDALELQAILAPYLGRCLGLADLNQLASALTNLYIDRGYVTTRALLP-PQDLKSGTL--R 142 (554)
T ss_pred CCCCCEEEEEEEEEECC-CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC-CCCCCCCEE--E
T ss_conf 77885078878998177-5578589998667751886678999999999999998669478899726-874557879--9
Q ss_pred EECCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 41233322011003333432003321001001000000012344456667765101234453325443565431023322
Q gi|254780772|r 357 YLIDQGSPLYVKRIEIEGNDQSYDSVIRRELELSEGDPINYSMIERAKRRIMATGYFSEVNISQLPANDVSDYVILRVSV 436 (781)
Q Consensus 357 ~~I~eg~~~~i~~I~I~GN~~T~d~VIrrel~~~~Gd~~~~~~i~~s~~~L~~lg~F~~V~i~~~~~~~~~~~vdl~i~v 436 (781)
T Consensus 143 l~VveG~---i~~i~i~g~~~~~~~~~~~~~p~~~g~~Ln~~~lEq~l~~l~~~P~~q-a~~~l~pg~-~~G~S~l~i~~ 217 (554)
T COG2831 143 LQVVEGR---IEDIRITGDSDLRSVALRSLFPAHRGDPLNLRDLEQGLELLNRLPGVQ-ADAELVPGS-EPGESDLVIKV 217 (554)
T ss_pred EEEEEEE---EEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC-CEEEECCCC-CCCCCEEEEEE
T ss_conf 9995218---565898278874146677547667899778899999999862274422-125677778-88841699984
Q ss_pred CCCCCCCCCCCCC-CCC--CCCCEEEECCCCCCCCCCCCCCCEEEEEEECCC--CEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 1122111111111-223--321100000111233323442200378741122--11113454112357775431001111
Q gi|254780772|r 437 KQLSAGSVGIATN-YEV--DKGMGVEGHIDDNNFFGQGYRARLAAGFGRHAV--QNYTFSVEDPYFLGSPISAGFDLQKT 511 (781)
Q Consensus 437 ~E~~tg~~~~g~g-ys~--~~g~~~~~~~~~~Nl~G~G~~l~l~~~~~~~~~--~~~~~s~~~P~~~~~~~s~~~~~~~~ 511 (781)
T Consensus 218 ~~~~~~~~~~~~DN~G~~~tG~~r~~~~l~~dn~lglgD~l~~~~~~~~~~~~~~~~~~~Ys~P~-g~~~~~~~~s~~~y 296 (554)
T COG2831 218 QQGKPWRVSASADNYGSKSTGRYRLGVGLSLDNPLGLGDQLSLSYSRSLDGQTTNNYSLSYSVPL-GYWTFSLGASYSEY 296 (554)
T ss_pred EECCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHEEEECCCCCCCCCCCEEEEEEEEEE-CCCCEEEEEEECCE
T ss_conf 43796789998637888666631567689726976521222310033677753224789999897-47535898501013
Q ss_pred CC------CCCCCCCCCCCCEEEEEEECCCCEEEEECC--CEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEEC-
Q ss_conf 33------333343233320245542025430235404--125776401467544201112210158502467884321-
Q gi|254780772|r 512 HL------EDGSLDINDESAAVRMIVPITESISTSFKY--DLRFLQYGAISEKEKIPSIYTTLIEHGKFSSHSISQSII- 582 (781)
Q Consensus 512 ~~------~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~- 582 (781)
T Consensus 297 ~~~~~~~~~~~~~~G~s~~~~~~l~~~l~R~~~~~~s~~~~~~~r~~~~~~~~~~~~~------q~r~~~~~~~gl~~~~ 370 (554)
T COG2831 297 RQVLEGPFDVLDYQGKSQNLSLRLSHPLLRNRSSKLSLGLGLSHRRSENYLDDTEIEV------QRRRLTAVELGLSGRR 370 (554)
T ss_pred EEECCCCCCEEEEECCEEEEEEEEEEEEEECCCCEEEEEEEEEEECCHHHHCCCCCCC------CCCCCCCEEECCEEEE
T ss_conf 4402567731453011135657875578976761688888999840600103443333------2212330897126899
Q ss_pred ---CCCCCCCCCCCCCEEEEEEECCC---CCC-CCCEEEEEEEEEEEEEEECC-CEEEEEEEEEEEEEEECCCCCCCCHH
Q ss_conf ---55420110024651565420245---655-54203666630047999358-80999999997898516997412301
Q gi|254780772|r 583 ---YNTLDNPIVPRKGMLISSSYDYA---GFG-GDSQYHRIGSRASYFYLLSD-DSDIVGSLRFGYGCVIPSNKNLQLFD 654 (781)
Q Consensus 583 ---~dtrD~~~~Pt~G~~~~~~~~~a---~~g-~d~~f~k~~~~~~~y~~l~~-~~~l~~~~~~g~~~~~~~~~~lp~~e 654 (781)
T Consensus 371 ~~~~~~~~~~l~~~~G~~~-~Ga~~~~~~~~~~~~~~f~~~~~~~~~~~~f~~~~~~~~~~~~~Q~-----s~~~L~s~e 444 (554)
T COG2831 371 YLGGGTLDASLGYRRGLGA-LGASKDDEETNGEPTSRFKKLNGNASLLQPFGLGPFLYATQFNAQY-----SGDPLLSSE 444 (554)
T ss_pred EECCCCCCCCCHHHCCCCC-CCCCCCCHHHCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEE-----CCCCCCCHH
T ss_conf 7136510322354428620-1881676110477764307999851677641655279986666788-----899788378
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 27507897140212686155037997222147899999999614565654537999999767741566667754445676
Q gi|254780772|r 655 QFSVSSNYYLRGFAYKGIGPRVDKKYAIGGKIYSSASAAVSFPMPLVPERAGLRGAFFVDSATLYANHVALGADKLEGND 734 (781)
Q Consensus 655 rF~lGG~~svRGy~~~~iGP~~~~~~~~GG~~~~~~s~E~r~pl~~~~~~~~l~~~~F~D~G~v~~~~~~~~~~~~~~~~ 734 (781)
T Consensus 445 ~fsiGg~~sVRGf~~~~ls----------gD~G~~~snel~~~~~~~--~~-~~~y~f~D~G~v~~~~~~~~-------~ 504 (554)
T COG2831 445 KFSIGGRYSVRGFDGGSLS----------GDRGWYLSNELRWPLPPG--GA-LQPYVFVDYGKVYNNSAEYL-------S 504 (554)
T ss_pred HEECCCCCEECCCCCCCCC----------CCCEEEEEEEEEEECCCC--CC-EEEEEEEEEEEEECCCCCCC-------C
T ss_conf 6531786523562688644----------341689976654303787--74-47988998678833455556-------7
Q ss_pred CCEEEEEEEEEEEECCC-CCEEEEEEEECCCCCCC--EEEEEEEEEEECC
Q ss_conf 64247999999975570-01589988722677876--0258999641059
Q gi|254780772|r 735 SFWRVSTGVEIMWNSPL-GMMGVYYGIPLRHREGD--KIQQFGFRIGNRM 781 (781)
Q Consensus 735 ~~~r~s~G~Glr~~tP~-Gpirld~a~pl~~~~~D--~~~~f~FsiG~~f 781 (781)
T Consensus 505 ~~~l~g~~~Glr~~~~~~~~~~l~~g~pl~~p~~~~~~~~~~~~~~~~~f 554 (554)
T COG2831 505 GETLAGAGLGLRGNLKDGFSYDLDLGRPLSKPAGFDNRRTVVGFSFSYSF 554 (554)
T ss_pred CCEEEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEC
T ss_conf 77166799767676067547899870063561236777630689999979