HHsearch alignment for GI: 254780772 and conserved domain: COG2831
>COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion].
Probab=99.40 E-value=8.5e-10 Score=81.41 Aligned_cols=159 Identities=19% Similarity=0.257 Sum_probs=118.1
Q ss_pred EECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-C
Q ss_conf 603663246778750443110122221110012211244566643102333345788888875423221001231012-4
Q gi|254780772|r 188 IEEGVKAKINSIRFVGNKNYSHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKVSSQVLFD-K 266 (781)
Q Consensus 188 I~EG~~~~I~~I~f~Gn~~f~~~~L~~~~~~k~~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V~~~~~~~-~ 266 (781)
T Consensus 67 ~~E~~~f~I~~i~l~g~~~~~~~~l~~~~~--------~~~g~~l~~~~l~~l~~~lt~~y~~~GYvtsra----~lp~Q 134 (554)
T COG2831 67 PDETPCFPINRIELEGNTLLDALELQAILA--------PYLGRCLGLADLNQLASALTNLYIDRGYVTTRA----LLPPQ 134 (554)
T ss_pred CCCCCEEEEEEEEEECCCCCCHHHHHHHHH--------HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE----ECCCC
T ss_conf 778850788789981775578589998667--------751886678999999999999998669478899----72687
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55554101220222210000012333444557677775321169962112100000000000023445642011233223
Q gi|254780772|r 267 QKSGYVLIFQIDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPFVRVKTRINR 346 (781)
Q Consensus 267 ~~~~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k~G~~~~~~~~~~~~~~i~~~y~~~GY~fa~v~~~~~~ 346 (781)
T Consensus 135 ~i~~G~l~l~VveG---~i~~i~i~g~~~-~~~~~~~~~~p~~~g~~Ln~~~lEq~l~~l~~~P~~q------a~~~l~p 204 (554)
T COG2831 135 DLKSGTLRLQVVEG---RIEDIRITGDSD-LRSVALRSLFPAHRGDPLNLRDLEQGLELLNRLPGVQ------ADAELVP 204 (554)
T ss_pred CCCCCEEEEEEEEE---EEEEEEECCCCC-CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC------CEEEECC
T ss_conf 45578799999521---856589827887-4146677547667899778899999999862274422------1256777
Q ss_pred CCCCCEEEEEEECCCCCCCEEE
Q ss_conf 4344046655412333220110
Q gi|254780772|r 347 DFAKRIVDIEYLIDQGSPLYVK 368 (781)
Q Consensus 347 d~~~~~vdi~~~I~eg~~~~i~ 368 (781)
T Consensus 205 g~~~G~S~l~i~~~~~~~~~~~ 226 (554)
T COG2831 205 GSEPGESDLVIKVQQGKPWRVS 226 (554)
T ss_pred CCCCCCCEEEEEEEECCCEEEE
T ss_conf 7888841699984437967899