HHsearch alignment for GI: 254780772 and conserved domain: COG2831

>COG2831 FhaC Hemolysin activation/secretion protein [Intracellular trafficking and secretion].
Probab=99.40  E-value=8.5e-10  Score=81.41  Aligned_cols=159  Identities=19%  Similarity=0.257  Sum_probs=118.1

Q ss_pred             EECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-C
Q ss_conf             603663246778750443110122221110012211244566643102333345788888875423221001231012-4
Q gi|254780772|r  188 IEEGVKAKINSIRFVGNKNYSHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKVSSQVLFD-K  266 (781)
Q Consensus       188 I~EG~~~~I~~I~f~Gn~~f~~~~L~~~~~~k~~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V~~~~~~~-~  266 (781)
T Consensus        67 ~~E~~~f~I~~i~l~g~~~~~~~~l~~~~~--------~~~g~~l~~~~l~~l~~~lt~~y~~~GYvtsra----~lp~Q  134 (554)
T COG2831          67 PDETPCFPINRIELEGNTLLDALELQAILA--------PYLGRCLGLADLNQLASALTNLYIDRGYVTTRA----LLPPQ  134 (554)
T ss_pred             CCCCCEEEEEEEEEECCCCCCHHHHHHHHH--------HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE----ECCCC
T ss_conf             778850788789981775578589998667--------751886678999999999999998669478899----72687


Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             55554101220222210000012333444557677775321169962112100000000000023445642011233223
Q gi|254780772|r  267 QKSGYVLIFQIDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPFVRVKTRINR  346 (781)
Q Consensus       267 ~~~~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k~G~~~~~~~~~~~~~~i~~~y~~~GY~fa~v~~~~~~  346 (781)
T Consensus       135 ~i~~G~l~l~VveG---~i~~i~i~g~~~-~~~~~~~~~~p~~~g~~Ln~~~lEq~l~~l~~~P~~q------a~~~l~p  204 (554)
T COG2831         135 DLKSGTLRLQVVEG---RIEDIRITGDSD-LRSVALRSLFPAHRGDPLNLRDLEQGLELLNRLPGVQ------ADAELVP  204 (554)
T ss_pred             CCCCCEEEEEEEEE---EEEEEEECCCCC-CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC------CEEEECC
T ss_conf             45578799999521---856589827887-4146677547667899778899999999862274422------1256777


Q ss_pred             CCCCCEEEEEEECCCCCCCEEE
Q ss_conf             4344046655412333220110
Q gi|254780772|r  347 DFAKRIVDIEYLIDQGSPLYVK  368 (781)
Q Consensus       347 d~~~~~vdi~~~I~eg~~~~i~  368 (781)
T Consensus       205 g~~~G~S~l~i~~~~~~~~~~~  226 (554)
T COG2831         205 GSEPGESDLVIKVQQGKPWRVS  226 (554)
T ss_pred             CCCCCCCEEEEEEEECCCEEEE
T ss_conf             7888841699984437967899