HHsearch alignment for GI: 254780772 and conserved domain: PRK11067
>PRK11067 outer membrane protein assembly factor YaeT; Provisional.
Probab=100.00 E-value=8.9e-43 Score=297.26 Aligned_cols=312 Identities=19% Similarity=0.296 Sum_probs=254.5
Q ss_pred EEEEEEEEECCCCCCHHHHHHHC---CCCCCCCCCHHHHHHH---HHHHHHCCCCC--EEEEEEE---CC--EEEEEEEE
Q ss_conf 26858999665007988999974---8789882688999999---99999679800--3899986---99--89999993
Q gi|254780772|r 46 SIVRRIEIRGATNVGKEVILSRI---PVVVGQSISDADLDHA---VKNIYAMGYFS--NVKIKIV---DS--VLIIDLIE 112 (781)
Q Consensus 46 ~~i~~I~i~G~~~i~~~~i~~~~---~~~~G~~~~~~~i~~~---i~~l~~~g~F~--~v~~~~~---~~--~l~~~v~e 112 (781)
T Consensus 92 P~I~~i~~~Gn~~i~~~~l~~~l~~~~lk~g~~~~~~~l~~~~~~i~~~Y~~~G~~~a~V~~~~~~~~~n~v~l~f~I~E 171 (801)
T PRK11067 92 PTIASITFSGNKAVKDDMLKQNLEASGVRVGEALDRTTLSNIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQE 171 (801)
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCEEEEEEEECCCCEEEEEEEEEE
T ss_conf 73899999887437889999877543646575469999999999999999967921219989998789986999999950
Q ss_pred CCE--EEEEEEECCCCCCHHHHHHHHHHCC---------CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE-EEEEC-CC
Q ss_conf 653--6579995654369889988730057---------86379999999999999999972970017998-76433-89
Q gi|254780772|r 113 RKI--INHLFFSGNNNLKDDQLKMIVRSRS---------AAAYDEDTVNADVHNIKQAYASIGYLNVMVKV-QHHSI-SP 179 (781)
Q Consensus 113 ~p~--i~~i~~~Gn~~~~~~~l~~~~~~~~---------g~~~~~~~~~~~~~~i~~~y~~~Gy~~a~V~~-~~~~~-~~ 179 (781)
T Consensus 172 G~~~~I~~I~f~GN~~fs~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~D~~~L~~fY~~~Gy~d~~V~~~~v~~~~dk 251 (801)
T PRK11067 172 GVSAKIQQINIVGNHAFTTDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDK 251 (801)
T ss_pred CCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCC
T ss_conf 88899999999878324789999886237664335761688549899998999999999871866226604425634776
Q ss_pred CCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 84258898603663246778750443110122221110012211244566643102333345788888875423221001
Q gi|254780772|r 180 TTLNITYVIEEGVKAKINSIRFVGNKNYSHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKVS 259 (781)
Q Consensus 180 ~~v~i~~~I~EG~~~~I~~I~f~Gn~~f~~~~L~~~~~~k~~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V~ 259 (781)
T Consensus 252 ~~~~I~~~I~EG~~Y~~g~i~~~gn~~~~~~el~~~~~~~~--------G~~y~~~~i~~~~~~i~~~~~~~GY~fa~V~ 323 (801)
T PRK11067 252 KGIYITVNITEGDQYKLSGVQVSGNLAGHSAEIEKLTKIEP--------GELYNGTKVTKMEDDIKKLLGRYGYAYPRVQ 323 (801)
T ss_pred CEEEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHCCCC--------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 26999999868974987237996777777899998754578--------8634699999999999999986697210046
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 23101245555410122022221000001233344455767777532116996211210000000000002344564201
Q gi|254780772|r 260 SQVLFDKQKSGYVLIFQIDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPFVR 339 (781)
Q Consensus 260 ~~~~~~~~~~~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k~G~~~~~~~~~~~~~~i~~~y~~~GY~fa~ 339 (781)
T Consensus 324 ~~~~~~~~~~~v~l~~~I~eg~~~yV~~I~I~GN~~-T~D~VIRRel~~~eGd~~~~~~i~~S~~rL~~l----g~-F~~ 397 (801)
T PRK11067 324 TQPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDT-SKDSVLRREMRQMEGAWLGSDLVEQGKERLNRL----GF-FET 397 (801)
T ss_pred CCEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCC-CHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHC----CC-CCC
T ss_conf 412674789889999998668627999867427706-134751010003676533888999999999855----87-420
Q ss_pred CCCCCCC-CCCCCEEEEEEECCCCCCCEEECCCCCC
Q ss_conf 1233223-4344046655412333220110033334
Q gi|254780772|r 340 VKTRINR-DFAKRIVDIEYLIDQGSPLYVKRIEIEG 374 (781)
Q Consensus 340 v~~~~~~-d~~~~~vdi~~~I~eg~~~~i~~I~I~G 374 (781)
T Consensus 398 V~~~~~~~~~~~~~vdl~~~V~E~~t---G~~~~g~ 430 (801)
T PRK11067 398 VDTDTQRVPGSPDQVDVVYKVKERNT---GSFNFGI 430 (801)
T ss_pred CCCCCCCCCCCCCEEEEEEEEEECCC---CEEEEEE
T ss_conf 34334358999873899999898678---8799998