HHsearch alignment for GI: 254780772 and conserved domain: TIGR00992

>TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family; InterPro: IPR005689 Chloroplast function requires the import of nuclear encoded proteins from the cytoplasm across the chloroplast double membrane. This is accompished by two protein complexes, the Toc complex located at the outer membrane and the Tic complex loacted at the inner membrane . The Toc complex recognises specific proteins by a cleavable N-terminal sequence and is primarily responsible for translocation through the outer membrane, while the Tic complex translocates the protein through the inner membrane. This entry represents Toc750, a core component of the Toc complex. This protein is deeply embedded in the outer membrane and forms the voltage-dependent translocation channel . Toc75 itself appears to be capable of at least some discrimination between substrate and non-substrate proteins, with recognition based on based on both conformational and electrostatic interactions. ; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0009707 chloroplast outer membrane.
Probab=100.00  E-value=1.4e-45  Score=316.01  Aligned_cols=455  Identities=17%  Similarity=0.223  Sum_probs=334.2

Q ss_pred             CCCCHHHHHHHHHCCCC-CEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCC-
Q ss_conf             45576777753211699-6211210000000000002344564201123322343440466554123332201100333-
Q gi|254780772|r  295 QEIQKKTLLSLIRIRSG-NLYNPQEIKESSEKISKYFFSGERPFVRVKTRINRDFAKRIVDIEYLIDQGSPLYVKRIEI-  372 (781)
Q Consensus       295 ~~~~~~~l~~~~~~k~G-~~~~~~~~~~~~~~i~~~y~~~GY~fa~v~~~~~~d~~~~~vdi~~~I~eg~~~~i~~I~I-  372 (781)
T Consensus       236 ~lLP~~V~~E~~~~~~~q~~~~~R~LQ~~~~~v~~WY~~~GY~~AQVV~~g~~~~~G---~V~~~v~EG~---~~~l~~~  309 (768)
T TIGR00992       236 CLLPQEVVDEVFGMLYGQGKVSARLLQEIRDRVQEWYHNEGYALAQVVNFGNLNTDG---EVVLEVVEGD---ITNLQIQ  309 (768)
T ss_pred             CCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC---EEEEEEECCC---EEEEEEE
T ss_conf             548736788999875405510067777788888631100575077873467637765---1899996471---2167899


Q ss_pred             ---------CCCCCCCCCCCHHHCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ---------3432003321001001--00000001234445666776510123445332544356543102332211221
Q gi|254780772|r  373 ---------EGNDQSYDSVIRRELE--LSEGDPINYSMIERAKRRIMATGYFSEVNISQLPANDVSDYVILRVSVKQLSA  441 (781)
Q Consensus       373 ---------~GN~~T~d~VIrrel~--~~~Gd~~~~~~i~~s~~~L~~lg~F~~V~i~~~~~~~~~~~vdl~i~v~E~~t  441 (781)
T Consensus       310 f~D~~~~~V~G--~T~~~vv~REl~kqL~~G~vFN~~~~~~~L~~~~SLgLF~~~~~~~~P~~~~~~~~IV~~~~~E~~~  387 (768)
T TIGR00992       310 FLDKLGNVVEG--NTRDPVVTRELPKQLKPGDVFNIEAGKTALQNINSLGLFSNIEVNPRPDEKNEGEIIVEIKLKELEQ  387 (768)
T ss_pred             EECCCCCEECC--CCCCCEEEECCHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEEEEEECCC
T ss_conf             97267874305--5466238523353257884441367888876543221000115546888888862799989985477


Q ss_pred             CCCCCCCCC-----------CCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC----CCCEEEEEEEECCCCCC--CC--
Q ss_conf             111111112-----------233211000001112333234422003787411----22111134541123577--75--
Q gi|254780772|r  442 GSVGIATNY-----------EVDKGMGVEGHIDDNNFFGQGYRARLAAGFGRH----AVQNYTFSVEDPYFLGS--PI--  502 (781)
Q Consensus       442 g~~~~g~gy-----------s~~~g~~~~~~~~~~Nl~G~G~~l~l~~~~~~~----~~~~~~~s~~~P~~~~~--~~--  502 (781)
T Consensus       388 ~saevsteWSI~~G~GG~P~~~S~~~~Gti~f~~RNL~G~N~~l~~~~~~~nflnPQ~~L~F~~~y~~Pyl~G~~nP~~~  467 (768)
T TIGR00992       388 KSAEVSTEWSIVPGRGGAPILASSQLGGTITFEERNLQGLNRSLGGSVTVSNFLNPQDDLLFKVEYTDPYLDGVDNPRNR  467 (768)
T ss_pred             CCEEEEEEEEEECCCCCCCCEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCC
T ss_conf             63033100255148888641000267621677201567756147898887144573113114544326634787774541


Q ss_pred             CCCCCCCCCCCC----------------CCCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEE----EECCCCC--CCCC
Q ss_conf             431001111333----------------33343233320245542025430235404125776----4014675--4420
Q gi|254780772|r  503 SAGFDLQKTHLE----------------DGSLDINDESAAVRMIVPITESISTSFKYDLRFLQ----YGAISEK--EKIP  560 (781)
Q Consensus       503 s~~~~~~~~~~~----------------~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~  560 (781)
T Consensus       468 ~~~~~~F~~R~lS~VF~G~~~sirt~~~~~s~~V~R~G~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~a~G~~~~~  547 (768)
T TIGR00992       468 TYKASLFNSRKLSLVFTGGPGSIRTVNEVPSIWVDRAGVKANITENFARQSKFTYGLVLEEIFTRDESRHINANGQRSLP  547 (768)
T ss_pred             EEEEEEEECCCEEEEEECCCCCEEEECCCCCCEEEECCCCEEEECCCHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCC
T ss_conf             15662230451015674788522221478986588515202431020233047857255101240011233316852466


Q ss_pred             H--------HHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC-CCCC-EEEEEEEEEEEEEEECC--
Q ss_conf             1--------1122101585024678843215542011002465156542024565-5542-03666630047999358--
Q gi|254780772|r  561 S--------IYTTLIEHGKFSSHSISQSIIYNTLDNPIVPRKGMLISSSYDYAGF-GGDS-QYHRIGSRASYFYLLSD--  628 (781)
Q Consensus       561 ~--------~~~~~~~~~~~~~~~i~~~l~~dtrD~~~~Pt~G~~~~~~~~~a~~-g~d~-~f~k~~~~~~~y~~l~~--  628 (781)
T Consensus       548 s~~~~G~~~~P~~lS~~GvD~l~~L~~~~~~DN~~~~~~~~~G~~~~F~~~Q~lgvG~~~~~~~R~~~~~~~fi~~~~~~  627 (768)
T TIGR00992       548 SGPLSGADGPPLTLSGTGVDRLAFLQANITRDNTKFVNGPVVGSRVRFQVDQGLGVGSGFIFFNRLQLTYTKFIQLNEVE  627 (768)
T ss_pred             CCCCCCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHEEECCCEEEEEEEEEEE
T ss_conf             66546778887100334312010010355301234202341121256643125455767501000101245666634430


Q ss_pred             -----------CEEEEEEEEEEEEEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEE
Q ss_conf             -----------809999999978985169974123012750789714021268615503799722214789999999961
Q gi|254780772|r  629 -----------DSDIVGSLRFGYGCVIPSNKNLQLFDQFSVSSNYYLRGFAYKGIGPRVDKKYAIGGKIYSSASAAVSFP  697 (781)
Q Consensus       629 -----------~~~l~~~~~~g~~~~~~~~~~lp~~erF~lGG~~svRGy~~~~iGP~~~~~~~~GG~~~~~~s~E~r~p  697 (781)
T Consensus       628 ~~GfGl~~~~~P~~~~l~~~~--G~~~---GDLP~Y~AF~LGG~~SVRGY~~GElG~---------aR~~~~~~AE~R~P  693 (768)
T TIGR00992       628 LGGFGLAGKSPPPVLVLHGHY--GGVV---GDLPSYDAFILGGPYSVRGYNMGELGA---------ARNILEVTAEIRIP  693 (768)
T ss_pred             CCCCCCCCCCCCCEEEEECCC--CCEE---CCCCCCCCEEECCCCCCCCCCCCCCCH---------HHHHHHHCCCCCCC
T ss_conf             466111136889889995232--4154---478872314406873004445544320---------23366530310144


Q ss_pred             CCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCC-CCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEE
Q ss_conf             4565654537999999767741566667754445-676642479999999755700158998872267787602589996
Q gi|254780772|r  698 MPLVPERAGLRGAFFVDSATLYANHVALGADKLE-GNDSFWRVSTGVEIMWNSPLGMMGVYYGIPLRHREGDKIQQFGFR  776 (781)
Q Consensus       698 l~~~~~~~~l~~~~F~D~G~v~~~~~~~~~~~~~-~~~~~~r~s~G~Glr~~tP~Gpirld~a~pl~~~~~D~~~~f~Fs  776 (781)
T Consensus       694 i~-----~~~G~~~Fv~~G~~LGS~~~V~G~P~~V~~~~G~G~~YG~Gv~l~~~~a~~~vD~Gf-----t~~G~~~~~F~  763 (768)
T TIGR00992       694 IK-----ATHGVYAFVEYGSDLGSSKDVKGNPTIVYRRPGQGSSYGAGVKLGLVRAEYAVDLGF-----TNEGTGAIFFR  763 (768)
T ss_pred             EE-----ECCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEECCC-----CCCCCEEEEEC
T ss_conf             11-----033047888415467867766888628863678862112203860431224662341-----56774378723


Q ss_pred             EEECC
Q ss_conf             41059
Q gi|254780772|r  777 IGNRM  781 (781)
Q Consensus       777 iG~~f  781 (781)
T Consensus       764 ~GE~f  768 (768)
T TIGR00992       764 FGERF  768 (768)
T ss_pred             CCCCC
T ss_conf             57769