HHsearch alignment for GI: 254780772 and conserved domain: TIGR00992

>TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase, IAP75 family; InterPro: IPR005689 Chloroplast function requires the import of nuclear encoded proteins from the cytoplasm across the chloroplast double membrane. This is accompished by two protein complexes, the Toc complex located at the outer membrane and the Tic complex loacted at the inner membrane . The Toc complex recognises specific proteins by a cleavable N-terminal sequence and is primarily responsible for translocation through the outer membrane, while the Tic complex translocates the protein through the inner membrane. This entry represents Toc750, a core component of the Toc complex. This protein is deeply embedded in the outer membrane and forms the voltage-dependent translocation channel . Toc75 itself appears to be capable of at least some discrimination between substrate and non-substrate proteins, with recognition based on based on both conformational and electrostatic interactions. ; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0009707 chloroplast outer membrane.
Probab=98.73  E-value=5.1e-08  Score=69.76  Aligned_cols=220  Identities=15%  Similarity=0.132  Sum_probs=150.2

Q ss_pred             EEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC----EEEEEEEECCEEEE-EEE
Q ss_conf             6858999665007988999974878988268899999999999679800389998699----89999993653657-999
Q gi|254780772|r   47 IVRRIEIRGATNVGKEVILSRIPVVVGQSISDADLDHAVKNIYAMGYFSNVKIKIVDS----VLIIDLIERKIINH-LFF  121 (781)
Q Consensus        47 ~i~~I~i~G~~~i~~~~i~~~~~~~~G~~~~~~~i~~~i~~l~~~g~F~~v~~~~~~~----~l~~~v~e~p~i~~-i~~  121 (781)
T Consensus       145 L~~E~~~~aT~g~~E~~~~~~~~~~~G~~~~~~~~~E~~~~~~~~~~~~NV~~~~~~~P~~~~~~~~~~~~~~f~~~l~~  224 (768)
T TIGR00992       145 LQKELEVLATCGMLEKVDLEGKTTQDGRLGVTISLAESVWAIADRFRCINVGLMPQSKPLEVDVDMEVKEKLEFTRRLEK  224 (768)
T ss_pred             HHHHHHHHCCCCCEEEEEECCEECCCCCEEEEEEEHHHHHHHHHCEEEEEEEECCCCCCCEECCCHHHCCCEEEEHHHHH
T ss_conf             77666552478620222113400689824789874123675540401587775246754100466000123111000111


Q ss_pred             E-------C-CCCCCHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCC
Q ss_conf             5-------6-543698899887300578-637999999999999999997297001799876433898425889860366
Q gi|254780772|r  122 S-------G-NNNLKDDQLKMIVRSRSA-AAYDEDTVNADVHNIKQAYASIGYLNVMVKVQHHSISPTTLNITYVIEEGV  192 (781)
Q Consensus       122 ~-------G-n~~~~~~~l~~~~~~~~g-~~~~~~~~~~~~~~i~~~y~~~Gy~~a~V~~~~~~~~~~~v~i~~~I~EG~  192 (781)
T Consensus       225 ~~~~~~~~a~~~lLP~~V~~E~~~~~~~q~~~~~R~LQ~~~~~v~~WY~~~GY~~AQVV~~-g~~~-~~G~V~~~v~EG~  302 (768)
T TIGR00992       225 RYKRRIAEARPCLLPQEVVDEVFGMLYGQGKVSARLLQEIRDRVQEWYHNEGYALAQVVNF-GNLN-TDGEVVLEVVEGD  302 (768)
T ss_pred             HHCCHHHCCCCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHCCCEEEEEECC-CCCC-CCCEEEEEEECCC
T ss_conf             1011013056554873678899987540551006777778888863110057507787346-7637-7651899996471


Q ss_pred             CEEEEEEEE--------ECCCCC--CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             324677875--------044311--0122221110012211244566643102333345788888875423221001231
Q gi|254780772|r  193 KAKINSIRF--------VGNKNY--SHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKVSSQV  262 (781)
Q Consensus       193 ~~~I~~I~f--------~Gn~~f--~~~~L~~~~~~k~~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V~~~~  262 (781)
T Consensus       303 ~~~l~-~~f~D~~~~~V~G~T~~~vv~REl~kqL~----------~G~vFN~~~~~~~L~~~~SLgL---F~~~~~~~~P  368 (768)
T TIGR00992       303 ITNLQ-IQFLDKLGNVVEGNTRDPVVTRELPKQLK----------PGDVFNIEAGKTALQNINSLGL---FSNIEVNPRP  368 (768)
T ss_pred             EEEEE-EEEECCCCCEECCCCCCCEEEECCHHHCC----------CCCEECHHHHHHHHHHHHHHHH---HCCCEECCCC
T ss_conf             21678-99972678743055466238523353257----------8844413678888765432210---0011554688


Q ss_pred             CCCCCCCCCCEEEEECCCCCC
Q ss_conf             012455554101220222210
Q gi|254780772|r  263 LFDKQKSGYVLIFQIDEGEIY  283 (781)
Q Consensus       263 ~~~~~~~~~~i~~~I~EG~~y  283 (781)
T Consensus       369 -~~~~~~~~IV~~~~~E~~~~  388 (768)
T TIGR00992       369 -DEKNEGEIIVEIKLKELEQK  388 (768)
T ss_pred             -CCCCCCEEEEEEEEEECCCC
T ss_conf             -88888627999899854776