HHsearch alignment for GI: 254780772 and conserved domain: pfam06898
>pfam06898 YqfD Putative stage IV sporulation protein YqfD. This family consists of several putative bacterial stage IV sporulation (SpoIV) proteins. YqfD of Bacillus subtilis is known to be essential for efficient sporulation although its exact function is unknown.
Probab=98.19 E-value=6.4e-05 Score=49.47 Aligned_cols=95 Identities=18% Similarity=0.254 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHC---CCCCCCC---CCHHHHH
Q ss_conf 99999999988889999999999999-998751146526858999665007988999974---8789882---6889999
Q gi|254780772|r 10 RIKRLLEKYFPRSFQMGFIILFYAIF-GLSAVYGSNTSIVRRIEIRGATNVGKEVILSRI---PVVVGQS---ISDADLD 82 (781)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~I~i~G~~~i~~~~i~~~~---~~~~G~~---~~~~~i~ 82 (781)
T Consensus 76 GlpF~~~r~~kR~~~~~G~~~f~~~l~~lS~-------fVW~I~i~G~~~~t~~~i~~~L~~~gi~~G~~k~~id~~~ie 148 (383)
T pfam06898 76 GLPFLFFRLRKRRGIVLGILLFVILLYFLSN-------FIWSIDIKTAKNIAEHEIRQQLNEIGVKSGVKKFSLDVYKLE 148 (383)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCCHHHHH
T ss_conf 7178999988879999999999999997840-------699999986998998999999998699778072778999999
Q ss_pred HHHHHHHHCCCCCEEEEEEECCEEEEEEEEC
Q ss_conf 9999999679800389998699899999936
Q gi|254780772|r 83 HAVKNIYAMGYFSNVKIKIVDSVLIIDLIER 113 (781)
Q Consensus 83 ~~i~~l~~~g~F~~v~~~~~~~~l~~~v~e~ 113 (781)
T Consensus 149 ~~l~~~--~~~i~Wv~v~i~Gt~l~v~v~Ek 177 (383)
T pfam06898 149 RELTDN--NNNIMWIGVRVRGTTLKVKVVEK 177 (383)
T ss_pred HHHHHH--CCCEEEEEEEEEEEEEEEEEEEC
T ss_conf 999864--89829999999836999999965