HHsearch alignment of GI: 254780772 and MMDB domain: 2qdf_A_249-335
>2qdf_A (A:249-335) OMP85, outer membrane protein assembly factor YAET; potra domain, protein transport; 2.20A {Escherichia coli K12} PDB: 2qcz_A 2v9h_A
Probab=99.43 E-value=4.3e-14 Score=109.06 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=70.0
Q ss_pred CEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEC-CCCCEEEEEEEECCC
Q ss_conf 5365799956543698899887300578637999999999999999997297001799876433-898425889860366
Q gi|254780772|r 114 KIINHLFFSGNNNLKDDQLKMIVRSRSAAAYDEDTVNADVHNIKQAYASIGYLNVMVKVQHHSI-SPTTLNITYVIEEGV 192 (781)
Q Consensus 114 p~i~~i~~~Gn~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~i~~~y~~~Gy~~a~V~~~~~~~-~~~~v~i~~~I~EG~ 192 (781)
-.|.+|.|+||+.++++.|.+.+.+++|++|++..+++++.+|+++|.++||+.|.|.+...+. +++.|+|+|.|+||+
T Consensus 2 y~v~~I~i~Gn~~~~~~~l~~~l~~~~G~~~~~~~l~~~~~~l~~~y~~~Gy~~a~V~~~~~~~~~~~~v~i~~~V~eg~ 81 (87)
T 2qdf_A 2 YKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGN 81 (87)
T ss_dssp CEEEEEEEEEECTTCHHHHHHHTCCCTTEECCHHHHHHHHHHHHHHHHTTTBSSCEEEEEEEEETTTTEEEEEEEEECCC
T ss_pred EEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEEEECC
T ss_conf 36731131157532114567663368999519999999999999999867986038987778848899898999997389
Q ss_pred CEEEE
Q ss_conf 32467
Q gi|254780772|r 193 KAKIN 197 (781)
Q Consensus 193 ~~~I~ 197 (781)
+++|+
T Consensus 82 ~~~i~ 86 (87)
T 2qdf_A 82 RFYVR 86 (87)
T ss_dssp BCCCC
T ss_pred CEEEC
T ss_conf 65755