HHsearch results for GI: 254780772 and protein with PDBid: 3efc_A
>3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane; 3.30A {Escherichia coli}
Probab=100.00 E-value=9e-36 Score=250.00 Aligned_cols=312 Identities=18% Similarity=0.290 Sum_probs=250.0
Q ss_pred EEECCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEE
Q ss_conf 99365365799956543698899887300578637999999999999999997297001799876433898425889860
Q gi|254780772|r 110 LIERKIINHLFFSGNNNLKDDQLKMIVRSRSAAAYDEDTVNADVHNIKQAYASIGYLNVMVKVQHHSISPTTLNITYVIE 189 (781)
Q Consensus 110 v~e~p~i~~i~~~Gn~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~i~~~y~~~Gy~~a~V~~~~~~~~~~~v~i~~~I~ 189 (781)
+.+..+|.+|+|+||+.++++.+...+++++|+.+++..+++++++| |. .|||. +|+.+. + + ..|++.|.
T Consensus 3 ~a~~~~I~~I~i~G~~~i~~~~i~~~~~~~~G~~~~~~~i~~~ik~L---~~-tg~F~-~V~i~~---~-g-~~l~i~V~ 72 (395)
T 3efc_A 3 MAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRAL---FA-TGNFE-DVRVLR---D-G-DTLLVQVK 72 (395)
T ss_dssp ---CCCEEEEECSCCSSSCHHHHHHTCSCCTTSCCCTHHHHHHHHHH---HH-HCCEE-EEEEEC---C-S-SEEEEEEE
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH---HH-CCCEE-EEEEEE---C-C-CEEEEEEE
T ss_conf 77771897899999841799999974689999937989999999999---96-79802-699996---2-9-99999999
Q ss_pred CCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 36632467787504431101222211100122112445666431023333457888888754232210012310124555
Q gi|254780772|r 190 EGVKAKINSIRFVGNKNYSHARLERVISIRTSGYFSFGKTDVYSKERMSFDEEAIRAFYHDRGYAAVKVSSQVLFDKQKS 269 (781)
Q Consensus 190 EG~~~~I~~I~f~Gn~~f~~~~L~~~~~~k~~~~~~~~~~~~~~~~~l~~D~~~l~~~Y~~~GY~d~~V~~~~~~~~~~~ 269 (781)
|.| .|.+|.|+||+.+++..|++.+.... ...+..+++..++.+.++|+++|.++||+++.|..... ..+..
T Consensus 73 E~p--~i~~i~~~Gn~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~Y~~~Gy~~~~v~~~~~-~~~~~ 144 (395)
T 3efc_A 73 ERP--TIASITFSGNKSVKDDMLKQNLEASG-----VRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVT-PLPRN 144 (395)
T ss_dssp ECC--EEEEEEEESCTTSCHHHHHHHHHHHT-----CCSSSCCCGGGHHHHHHHHHHHHHTTTCCSCEEEEECC-BCTTS
T ss_pred ECC--EEEEEEEECCCCCCHHHHHHHHHCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE-ECCCC
T ss_conf 446--16037999762134445433210134-----34444123566899999999999870863221023775-24675
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC---------CCEECCCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 54101220222210000012333444557677775321169---------962112100000000000023445642011
Q gi|254780772|r 270 GYVLIFQIDEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRS---------GNLYNPQEIKESSEKISKYFFSGERPFVRV 340 (781)
Q Consensus 270 ~~~i~~~I~EG~~y~i~~i~i~g~~~~~~~~~l~~~~~~k~---------G~~~~~~~~~~~~~~i~~~y~~~GY~fa~v 340 (781)
.+.+++.|+||++.++.+|.|.|+. .++..+|.+.+..++ +..|+...++.+.++|.++|.++||..++|
T Consensus 145 ~v~v~~~I~Eg~~~kI~~I~f~Gn~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~Y~~~Gy~d~~v 223 (395)
T 3efc_A 145 RVDLKLVFQEGVSAEIQQINIVGNH-AFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI 223 (395)
T ss_dssp EEEEEEEEECCCCCCCCCCEEESCC-SSCTTTTGGGCCCCSSCCSCCSCTTTHHHHHHHHHHHHHHHHHHHHTTCTTCEE
T ss_pred EEEEEEEEECCCCCCCEEEEEECCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHCCEEEEEE
T ss_conf 0554443200554221378983353-331155554443011100111013433222000031888888985567589997
Q ss_pred CC-CCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH----HHCCCC
Q ss_conf 23-3223434404665541233322011003333432003321001001000000012344456667765----101234
Q gi|254780772|r 341 KT-RINRDFAKRIVDIEYLIDQGSPLYVKRIEIEGNDQSYDSVIRRELELSEGDPINYSMIERAKRRIMA----TGYFSE 415 (781)
Q Consensus 341 ~~-~~~~d~~~~~vdi~~~I~eg~~~~i~~I~I~GN~~T~d~VIrrel~~~~Gd~~~~~~i~~s~~~L~~----lg~F~~ 415 (781)
.. ....+.+...+.++|.|+||+++++++|.|.||..-.+..+.+.+.++||++|+...+.+...+|.. .||..
T Consensus 224 ~~~~~~~~~~~~~v~i~i~i~EG~~y~v~~i~i~Gn~~~~~~~l~~~l~~~~g~~f~~~~~~~~~~~i~~~y~~~GY~~- 302 (395)
T 3efc_A 224 DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAY- 302 (395)
T ss_dssp EECCCEECTTSCSEECEEEEECCCCCEEEEECCBSCCTTCHHHHHHTCCCCSSCBCCHHHHHHHHHHHHHHHHHTTCSS-
T ss_pred CCCEEEECCCCCCCEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC-
T ss_conf 0216898157775157530244404788776650572000134555543204632340121002457899997517532-
Q ss_pred CCCCCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf 4533254-4356543102332211221
Q gi|254780772|r 416 VNISQLP-ANDVSDYVILRVSVKQLSA 441 (781)
Q Consensus 416 V~i~~~~-~~~~~~~vdl~i~v~E~~t 441 (781)
+.+.+.+ ....+..++|.+.+.|.+.
T Consensus 303 a~v~~~~~~~~~~~~v~l~~~I~eg~~ 329 (395)
T 3efc_A 303 PRVQSMPEINDADKTVKLRVNVDAGNR 329 (395)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECCCC
T ss_pred CCCCCCCEECCCCCEEEEEEEECCCCC
T ss_conf 124663045056738999999844881