RPSBLAST alignment for GI: 254780772 and conserved domain: pfam07244

>gnl|CDD|148699 pfam07244, Surf_Ag_VNR, Surface antigen variable number repeat. This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by pfam01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure. Length = 78
 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 366 YVKRIEIEGNDQSY-DSVIRRELELSEGDPINYSMIERAKRRI----MATGY-FSEVNIS 419
            +K I IEGN +   D V+RREL+L EGD  N   +E    R+     A GY F++V + 
Sbjct: 2   KIKDINIEGNLKRTKDEVLRRELKLKEGDVFNREKLEEDIERLYDYYGALGYAFADVKVE 61

Query: 420 QLPANDVSDYVI 431
             P     D   
Sbjct: 62  PEPDPKTVDLTF 73