RPSBLAST alignment of GI: 254780772 and protein with PDBid: 3efc

>3efc_A OMP85, outer membrane protein assembly factor YAET; potra fold, cell membrane, cell outer membrane; 3.30A {Escherichia coli} Length = 395
 Score =  210 bits (535), Expect = 1e-54
 Identities = 103/391 (26%), Positives = 183/391 (46%), Gaps = 6/391 (1%)

Query: 43  SNTSIVRRIEIRGATNVGKEVILSRIPVVVGQSISDADLDHAVKNIYAMGYFSNVKIKIV 102
           +   +V+ I   G   V     L  +PV  G +++D D+ + ++ ++A G F +V++   
Sbjct: 4   AEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRD 63

Query: 103 DSVLIIDLIERKIINHLFFSGNNNLKDDQLKMIVRSRSAAA---YDEDTVNADVHNIKQA 159
              L++ + ER  I  + FSGN ++KDD LK  + +         D  T+      ++  
Sbjct: 64  GDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDF 123

Query: 160 YASIGYLNVMVKVQHHSISPTTLNITYVIEEGVKAKINSIRFVGNKNYSHARLERVISIR 219
           Y S+G  +  VK     +    +++  V +EGV A+I  I  VGN  ++   L     +R
Sbjct: 124 YYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLR 183

Query: 220 TSGYFSFGKTD-VYSKERMSFDEEAIRAFYHDRGYAAVKV-SSQVLFDKQKSGYVLIFQI 277
               +     D  Y K++++ D E +R++Y DRGYA   + S+QV     K G  +   I
Sbjct: 184 DEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNI 243

Query: 278 DEGEIYTVGNISIQSTLQEIQKKTLLSLIRIRSGNLYNPQEIKESSEKISKYFFSGERPF 337
            EG+ Y +  + +   L       +  L +I  G LYN  ++ +  + I K        +
Sbjct: 244 TEGDQYKLSGVEVSGNL-AGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAY 302

Query: 338 VRVKTRINRDFAKRIVDIEYLIDQGSPLYVKRIEIEGNDQSYDSVIRRELELSEGDPINY 397
            RV++    + A + V +   +D G+  YV++I  EGND S D+V+RRE+   EG  +  
Sbjct: 303 PRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGS 362

Query: 398 SMIERAKRRIMATGYFSEVNISQLPANDVSD 428
            ++++ K R+   G+F  V+          D
Sbjct: 363 DLVDQGKERLNRLGFFETVDTDTQRVPGSPD 393