HHsearch alignment for GI: 254780773 and conserved domain: COG1994

Probab=96.17  E-value=0.0028  Score=42.29  Aligned_cols=72  Identities=28%  Similarity=0.341  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHEEEEECCCEEEEEEEEEECCEEECCCCCCCHHHHCCCCCCCCHHHH
Q ss_conf             99999997337799999849750045530683112786059807999977112111001244550665036842101342
Q gi|254780773|r   14 LIIIVVIHEFGHYMVARLCNIRVLSFSVGFGPELIGITSRSGVRWKVSLIPLGGYVSFSEDEKDMRSFFCAAPWKKILTV   93 (349)
Q Consensus        14 l~~~v~iHE~GH~~~Ar~~gv~V~~FsiGfgp~l~~~~~k~~t~y~i~~~PlGgyV~~~~~e~~~~~f~~~~~~~R~~i~   93 (349)
T Consensus        51 l~~rl~l~~~gh~~~~~~~~~~l~--~~~i-------------------~~~~g~~~~~~~~v~~~~~~~~~-~~g~lvs  108 (230)
T COG1994          51 LAHRLVLHPLGHSDEAGRLGLKLL--LALL-------------------FGFGGFGFLKPVPVNPRGEFLIR-LAGPLVS  108 (230)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHH--HHHH-------------------HHHHHHHEECCCCCCHHHHHHHC-CCCHHHH
T ss_conf             999999986013999998787799--9999-------------------98658841044661658864111-3314999


Q ss_pred             HH-HHHHHHHHHHHH
Q ss_conf             11-233321122111
Q gi|254780773|r   94 LA-GPLANCVMAILF  107 (349)
Q Consensus        94 ~A-Gp~~N~ilA~ii  107 (349)
T Consensus       109 ~algpl~ni~la~~~  123 (230)
T COG1994         109 LALGPLTNIALAVLG  123 (230)
T ss_pred             HHHHHHHHHHHHHHH
T ss_conf             988899888999999