HHsearch alignment for GI: 254780773 and conserved domain: COG3975

>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only].

Probab=97.62  E-value=8.2e-05  Score=52.91  Aligned_cols=59  Identities=27%  Similarity=0.397  Sum_probs=44.8

Q ss_pred             CCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCC
Q ss_conf             0002456755653001456628888783045400111110146788631699965873131011211
Q gi|254780773|r  121 VVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPLHEISLVLYREHVGVLHLKVMPR  187 (349)
Q Consensus       121 ~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~dl~~~i~~~~g~~v~i~v~R~~~~~~~~~v~p~  187 (349)
T Consensus       465 ~i~~V~~~gPA~~AGl~~Gd~ivai~G~s-~------~l~~~~~~d~i~v~~~~~~~-L~e~~v~~~  523 (558)
T COG3975         465 KITFVFPGGPAYKAGLSPGDKIVAINGIS-D------QLDRYKVNDKIQVHVFREGR-LREFLVKLG  523 (558)
T ss_pred             EEEECCCCCHHHHCCCCCCCEEEEECCCC-C------CCCCCCCCCCEEEEECCCCC-EEEEECCCC
T ss_conf             99844789816751588756799976735-5------52214426624899825782-388521368