HHsearch alignment for GI: 254780773 and conserved domain: PRK09681

>PRK09681 putative type II secretion protein GspC; Provisional.
Probab=96.94  E-value=0.0011  Score=45.17  Aligned_cols=58  Identities=21%  Similarity=0.377  Sum_probs=45.1

Q ss_pred             CCCCCH---HHHHHCCCCCEEEEECCCCCCCCHHHHHHCCC-CCCCCCEEEEEECCCCEEEEC
Q ss_conf             456755---65300145662888878304540011111014-678863169996587313101
Q gi|254780773|r  125 VSPASP---AAIAGVKKGDCIISLDGITVSAFEEVAPYVRE-NPLHEISLVLYREHVGVLHLK  183 (349)
Q Consensus       125 V~~~sp---A~~AGL~~GD~Il~InG~~V~s~~dl~~~i~~-~~g~~v~i~v~R~~~~~~~~~  183 (349)
T Consensus       254 l~PGkd~~lF~~~Glq~gDlavsiNG~dLtDp~~a~~~~~~l~~ate~~ltVeRdGq~-~~I~  315 (319)
T PRK09681        254 VKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGAR-YDIS  315 (319)
T ss_pred             ECCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCEE-EEEE
T ss_conf             2799888999972999888889826966789899999999600071558999979968-9999