HHsearch results for GI: 254780773 and protein with PDBid: 1g9o_A
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.41 E-value=2e-07 Score=69.45 Aligned_cols=60 Identities=25% Similarity=0.449 Sum_probs=49.9
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 332000245675565300145662888878304540--0111110146788631699965873
Q gi|254780773|r 118 MKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHVG 178 (349)
Q Consensus 118 ~~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~~ 178 (349)
....|..|.|+|||+++||++||+|++|||+++.++ +|+.+.++.+ ++.+++++.|.+.+
T Consensus 27 ~~~~V~~V~~~s~A~~~Gl~~GD~Il~INg~~v~~~~~~ev~~li~~~-~~~v~L~V~~~~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA-LNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEECCCCC
T ss_conf 997999988899699859998999999999999999899999999759-99799999899977