HHsearch results for GI: 254780773 and protein with PDBid: 1n7e_A
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.15 E-value=1.5e-06 Score=63.39 Aligned_cols=57 Identities=14% Similarity=0.269 Sum_probs=49.7
Q ss_pred CCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 2000245675565300-145662888878304540--011111014678863169996587
Q gi|254780773|r 120 PVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHV 177 (349)
Q Consensus 120 p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~ 177 (349)
.+|.+|.++|||+++| |++||+|++|||+++.+. +|..+.+++. ++++++++.|...
T Consensus 32 v~V~~i~~gg~A~~~G~l~~GD~Il~VNg~~v~~~~~~ev~~llk~~-~~~v~L~v~r~~~ 91 (97)
T 1n7e_A 32 IIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA-GETVTLKIKKQTD 91 (97)
T ss_dssp CEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCCC
T ss_pred EEEEEECCCCCHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECCC
T ss_conf 99999889984431499998999999999997899899999999759-9859999988999