HHsearch results for GI: 254780773 and protein with PDBid: 1n7e_A

>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.15  E-value=1.5e-06  Score=63.39  Aligned_cols=57  Identities=14%  Similarity=0.269  Sum_probs=49.7

Q ss_pred             CCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             2000245675565300-145662888878304540--011111014678863169996587
Q gi|254780773|r  120 PVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       120 p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      .+|.+|.++|||+++| |++||+|++|||+++.+.  +|..+.+++. ++++++++.|...
T Consensus        32 v~V~~i~~gg~A~~~G~l~~GD~Il~VNg~~v~~~~~~ev~~llk~~-~~~v~L~v~r~~~   91 (97)
T 1n7e_A           32 IIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA-GETVTLKIKKQTD   91 (97)
T ss_dssp             CEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCCC
T ss_pred             EEEEEECCCCCHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECCC
T ss_conf             99999889984431499998999999999997899899999999759-9859999988999