HHsearch results for GI: 254780773 and protein with PDBid: 1p1d_A
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.42 E-value=1.7e-07 Score=70.00 Aligned_cols=57 Identities=19% Similarity=0.363 Sum_probs=49.0
Q ss_pred CCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 2000245675565300-145662888878304540--011111014678863169996587
Q gi|254780773|r 120 PVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHV 177 (349)
Q Consensus 120 p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~ 177 (349)
.+|.++.++|||+.+| |++||+|++|||+++.++ +++.+.+++. ++.+.+++.|+++
T Consensus 137 i~V~~v~~~s~A~~~G~L~~GD~Il~INg~~v~~~s~~~~~~~L~~~-~~~v~L~V~R~~d 196 (196)
T 1p1d_A 137 LVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRKDED 196 (196)
T ss_dssp CEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEECCCC
T ss_pred EEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEECCCC
T ss_conf 77867517972665279988989998999998899999999999849-9979999983899